Pseudomonas protegens Pf-5, PFL_6029

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6029
Name
Replicon chromosome
Genomic location 6848976 - 6850382 (+ strand)

Cross-References

RefSeq YP_263087.1
GI 70733313
Entrez 3480400
INSDC AAY95218.1
NCBI Locus Tag PFL_6029
UniParc UPI000054E245
UniProtKB Acc Q4K3U6
UniProtKB ID Q4K3U6_PSEF5
UniRef100 UniRef100_Q4K3U6
UniRef50 UniRef50_Q9HTR0
UniRef90 UniRef90_Q4K3U6

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug efflux protein NorA
Synonyms
Evidence for Translation
Charge (pH 7) 11.00
Kyte-Doolittle Hydrophobicity Value 0.809
Molecular Weight (kDa) 49861.9
Isoelectric Point (pI) 9.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 452 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001295 (965 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6029

Human Homologs

References

No references are associated with this feature.