Pseudomonas protegens Pf-5, PFL_5825 (pilI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 39 157 4.8E-21
Gene3D G3DSA:2.40.50.180 - - - 55 121 4.8E-21
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 38 170 1.2E-27
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 32 172 7.85E-29
SMART SM00260 chew_2 IPR002545 CheW-like domain 32 169 5.2E-17
PANTHER PTHR22617 CHEMOTAXIS SENSOR HISTIDINE KINASE-RELATED IPR039315 Chemotaxis protein CheW 27 158 1.3E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.