Pseudomonas protegens Pf-5, PFL_5523 (nrdR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0045892 | negative regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00440
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0008270 | zinc ion binding |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00440
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Hamap | MF_00440 | Transcriptional repressor NrdR [nrdR]. | IPR003796 | Ribonucleotide reductase regulator NrdR-like | 20 | 172 | 80.40947 |
| NCBIfam | TIGR00244 | JCVI: transcriptional regulator NrdR | IPR003796 | Ribonucleotide reductase regulator NrdR-like | 20 | 166 | 3.1E-70 |
| PANTHER | PTHR30455 | TRANSCRIPTIONAL REPRESSOR NRDR | IPR003796 | Ribonucleotide reductase regulator NrdR-like | 20 | 170 | 5.9E-62 |
| Pfam | PF03477 | ATP cone domain | IPR005144 | ATP-cone domain | 71 | 155 | 4.3E-13 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.