Pseudomonas protegens Pf-5, PFL_5271 (gluQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGGCAAGCCCATGCGCGAGCACTTCACCAAGATCCTGAACAAGTGGAAACAGGACTTGATGCAGGAAGTCGACCGCACTGTTGATCACATGAAAGACGA AGCGGCCAACTTCCCCGACCCGGCTGACCGTGCCAGCCAGGAAGAAGAGTTCAGCCTCGAACTGCGGGCCCGCGATCGCGAGCGCAAGTTGATCAAGAAG ATCGACAAGACCCTGCAACTGATCGAAGACGAAGAATACGGCTGGTGCGAATCCTGCGGCGTCGAGATCGGTATCCGCCGGCTGGAAGCCCGCCCAACCG CCGACATGTGCGTCGACTGCAAGACACTGGCGGAAATCAAGGAAAAACAGGTCGGCAAATAATCGCCGGCTGGAACCTGAAACGGAGCGTACCCACGCTC CGTTTTCGTTTCTACCTTCCCTGCAAGAGCAAGCCCGCTCGCCAAAGCGATCCCCCGGCACCATCGTCACCCCGGGGCCAGACGAAGTAACATCCGCTCC
|
|
| DNA Sequence for Gene |
>PFL_5271
|gluQ
ATGACTGCCTCCACCTCTTCCTCGTACATCGGGCGCTTCGCCCCCACTCCCAGCGGCTATCTGCATTTCGGCTCTCTGGTTGCCGCGCTTGCCTCCTATC TTGATGCCCGCGCCGTCGGCGGCCGCTGGCTGCTGCGCATGGAGGACCTTGACCCGCCTCGGGAAGAGCCCGGTGCCCAGGCGGCCATTCTCAAGGCACT GGAAAGCTACGGTTTCGAATGGGACGGGCAGATGATCCGCCAGAGCGATCGCCACGACGCCTATGGCGAAGTCCTCAATCGCCTGTTCCAGCAGGGCCTG GCCTATGCCTGCACCTGTTCGCGCAAACAGCTGGAGCCCTACCATGGCATTTACCCAGGACTGTGCCGCAACCTCGGCCACGCCCAGGACGACGCCGCGA TCCGCCTGCGGGTACCCGAACTGGAGTATCGCTTCGTCGACCGGGTCCAGGGCGAATACCGCCAGCACCTGGGTCGGGAAGTGGGGGACTTCGTGATCCG CCGCCGCGACGGTCTCTACGCTTACCAACTGGCCGTGGTGCTTGACGATGCCTGGCAAGGCATCACTGATATCGTGCGCGGCGCCGACCTGCTGGATTCC ACACCGCGCCAGCTGTACCTGCAGGAACTGCTGGGCCTTTCCCAGCCCCGCTACTTGCATGTACCGCTGATCACCCAGCCGGACGGGCACAAACTGGGCA AGTCCTACCGCTCGCCCCCGCTGACCGAGGATCAGGCCCCGCCCCTGCTGCTGCGCGCCCTGCGGGCACTGGGCCAGAAGCCACCGGCCGACCTCGATGG CGCCAGCGTCGCGCAGATAATGGCCTGGGGCATGGCCCACTGGGATGCCGCCCTGATTCCACGCACACTGAGCGTGCCGGAAGCGCAATTAAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCCACTTGCAGCTTGGCGCCCATCCGTTACCATCGCCGCACGTTTTCGGGCACGCACACAATAAAGAGAGGCCGAGATGTACATCTATCGCTTGGTCCT GCTCCTGGTAGTGGGGATCTATCTGTTCTCCCCCGCCATCATGGATTGGTGGATCGATGCTACTGGCGCCTGGTATCGCCCGTATCTGCTCTGGCTGATT CTGATCGTCGTGACCTTCATCCTGCAGAAGCCAAAAGATGCCGATGAGCTTTAGCCTGACCCAGATGATCCTGATCAGCGCCGCCTACCTGGCGGTGCTG TTCGGCGTTGCCTGGATCAGTGAGCGCGGGATGATCCCCCGCTCGATCATTCGCCACCCGCTGACCTACACCCTGTCACTCGGGGTCTATGCCAGCGCCT GGGCGTTCTACGGCACGGTCGGCCTGGCCTACCAGTACGGCTATGGCTTCCTGTCCAGTTACCTGGGGGTTTCCGGGGCCTTCCTGCTGGCACCGGTACT
|
|
| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) synthetase
MTASTSSSYIGRFAPTPSGYLHFGSLVAALASYLDARAVGGRWLLRMEDLDPPREEPGAQAAILKALESYGFEWDGQMIRQSDRHDAYGEVLNRLFQQGL AYACTCSRKQLEPYHGIYPGLCRNLGHAQDDAAIRLRVPELEYRFVDRVQGEYRQHLGREVGDFVIRRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDS TPRQLYLQELLGLSQPRYLHVPLITQPDGHKLGKSYRSPPLTEDQAPPLLLRALRALGQKPPADLDGASVAQIMAWGMAHWDAALIPRTLSVPEAQLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|