Pseudomonas protegens Pf-5, PFL_4842

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4842
Name
Replicon chromosome
Genomic location 5586092 - 5586850 (+ strand)

Cross-References

RefSeq YP_261923.1
GI 70732167
Entrez 3479253
INSDC AAY94072.1
NCBI Locus Tag PFL_4842
UniParc UPI000054DDCE
UniProtKB Acc Q4K760
UniProtKB ID Q4K760_PSEF5
UniRef100 UniRef100_Q4K760
UniRef50 UniRef50_E6RJB5
UniRef90 UniRef90_K9NPN5

Product

Feature Type CDS
Coding Frame 1
Product Name
3-ketoacyl-ACP reductase
Synonyms
Evidence for Translation
Charge (pH 7) -1.16
Kyte-Doolittle Hydrophobicity Value 0.094
Molecular Weight (kDa) 27.0
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003017 (954 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4842

Human Homologs

References

No references are associated with this feature.