Pseudomonas protegens Pf-5, PFL_4470 (phoP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4470
Name
phoP
Replicon chromosome
Genomic location 5180895 - 5181572 (- strand)

Cross-References

RefSeq YP_261558.1
GI 70731816
Entrez 3478589
INSDC AAY93721.1
NCBI Locus Tag PFL_4470
UniParc UPI000054DC63
UniProtKB Acc Q4K875
UniProtKB ID Q4K875_PSEF5
UniRef100 UniRef100_Q4K875
UniRef50 UniRef50_Q0C2L9
UniRef90 UniRef90_Q4K875

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding response regulator PhoP
Synonyms
Evidence for Translation
Charge (pH 7) -4.59
Kyte-Doolittle Hydrophobicity Value -0.326
Molecular Weight (kDa) 25.6
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001137 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4470
Search term: phoP

Human Homologs

References

No references are associated with this feature.