Pseudomonas protegens Pf-5, PFL_4333 (asnB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCAGCCCGGACTACCTGCCCATCGTCGGCCCCCTGGCGGACCCGCTTGCCTTTGCCGAAACCTACGCCGCCCTGGGCAAGGATGCGCGCCAGGTGCCGG ACCTGCCCTGCCCCTGGCTCGACGGCCTGTACATCAACAGTGGCCACGGTTCCCGTGGGCTGATCACCGCGCCGCTGTCCGGCGAGCTGCTGGCCGCCTG GCTGGAAAACGAGCCCCTGCCCCTGCCCAGAAGCGTGGCCGAAGCCTGCCATCCGAACCGTTTTGCCCTGCGTCGCCTGATTCGCGGCAAGGCCTGAAGC AGAGCGGCGGCGCTGACTTTCCAGCGCCGCCAATGGCCGCTGGCCAGCACCAAGCGCTACATCCAACCGTCCGGCCCCACTCAACTGCTTATAACCGATC GATCTAAAACTCCCGAGTTACGCACAGGTCAGTTTCCAGGTAGCCGCCCTTTTGACGGCGGCAGATTGACTCTCCCCAACGGAAAAACCGGTAAGGACTT
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| DNA Sequence for Gene |
>PFL_4333
|asnB
ATGTGCGGACTAGCTGGCGAATTACGCTTTGATCATCAACCTGCCGACCTGGCAGCGGTTGAACGAATCACCCACCACCTGGCCCCTCGCGGGCCGGACG CCTGGGGCTTTCACAGCCAGGGCCCGATTGCCCTCGGCCATCGACGGTTGAAAATCATGGACCTTTCGGACGGCTCGGCGCAGCCCATGGTCGACAACCA ACTGGGCCTGTCCCTGGCCTTCAATGGCGCGATCTACAACTTCCCCGAACTGCGCGCCGAACTGGAAGCCAAGGGTTATGCCTTCTATTCCGGCGGCGAC ACTGAGGTGTTGCTCAAGGGCTACCACGCCTGGGGCGCGGACCTGCTGCCCAAGCTCAACGGCATGTTCGCCTTCGCCATCTGGGAGCGCGATGCCCAGC GCCTGTTCATCGCCCGCGACCGCCTCGGGGTCAAGCCGCTGTACCTGTCGCGCACCGGCCAGCGCCTGCGCTTCGCTTCGGCCCTGCCGGCGTTGCTCAA AGGTGGCGACATCAACCCGTTGCTCGACCCCGTGGCGCTCAACCACTACCTGAACTTCCATGCCGTGGTGCCAGCACCGCGAACCCTGCTGGCAGGCATC GAAAAACTGCCGCCGGCCACCTGGATGCGTATCGAGGCCGACGGCCGCACCGAGCAGCAGACCTGGTGGACCCTGCCCTACGGCCCCCGTGCCGACGAAA CCAACCTGACGCTGGAAGACTGGCGTGACCGGGTGCTGGACAGCACCCGCGAAGCGGTGGCCATCCGCCAACGGGCAGCAGTGGATGTGGGCGTGCTGCT GTCCGGCGGTGTCGACTCCAGCTTGCTGGTGGGCCTGCTGCGAGAGGTCGGGGTGGACAACCTGTCGACCTTCTCCATCGGCTTCGAGGACGCCGGTGGC GAGCGGGGCGACGAGTTCCAGTACTCCGACCTGATTGCCCGGCACTACGGCACCCGGCATCACCAGTTGCGCATCGATGAACGTGAAATCATCGAACAGT TGCCCGCGGCCTTTCGGGCCATGAGCGAGCCGATGGTCAGCCACGACTGCATCGCTTTCTACCTGCTGTCCCGGGAAGTGGCCAAGCACTGCAAGGTAGT GCAAAGCGGCCAGGGCGCCGACGAACTCTTTGCCGGCTACCACTGGTACCCGCAGGTGGACGGCGCCAGCGACCCCTACGCGGCCTACCGTGCGGCCTTC TTCGACCGCAGCTACGACGACTACGCGGCCACCGTACAACCGCAGTGGCTGACCGCCAACGATGCCGCCGGGGATTTTGTCCGCGAGCATTTCGCCCAGC CCGGCGCCGACGCAGCTGTGGATAAGGCCCTGCGCCTGGACAGCACGGTGATGCTGGTGGATGACCCGGTCAAGCGTGTGGATAACATGACCATGGCCTG GGGCCTGGAGGCGCGCACGCCGTTCCTCGACTACCGCCTGGTGGAGCTTTCGGCCCGGGTGCCGGCGCGCTTCAAGTTGCCGGACGGCGGCAAGCAGGTG CTCAAGGAAGCTGCGCGGCTGGTGATCCCCAGCGAGGTGATCGACCGCAAGAAAGGCTACTTCCCGGTGCCGGGCCTCAAGCACTTGCAGGGCGCGACCC TGGACTGGGTACGCGAACTGCTGCTGGACCCGAGCCAGGATCGCGGCCTGTTCAAGCCGGCCATGCTCGACCGCCTGCTGACCGATCCCCAGGGCCAGTT GACGCCCTTGCGCGGCTCCAAGCTGTGGCAACTGGCGGCATTGAACCTGTGGCTCAGCGAACAAGGAATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATGAAAGCTCACGCCACGGCTTACAGCCAACGCCTGCTGCGCGGCCAGGCGCCGTCCTATGAACGCCTGCAGGCGCGCTTCGCCGAAGACGGCAGCG AACCCGGGTGCGAACCGATCGCGGTACATTGCGGTTGGGGCCGCCTGCTGATCGGCCATACCTTTCCCGACCCCACCAGCCTGGCCGGGGAGTTGCTCAA CGAGCGACCTGGCGAACGCGACATCGCTCTGTATGTGGCGGCGCCACAACAAGTGCTGGGGCTGGAACCGGCGCAACTGTTCCTCGACCCTTCCGATACC CTGCGCCTGTGGTTCAGCGATTACCGCCAGGCCACTCGGGTATTTCGCGGTTTCCGCATCCGTCGCGCCCAGAGCGAAGCCGACTGGCAAGCCATCAACC AGCTGTACCAGGCCCGCGGCATGCTGCCCATCGACCCGCAACTGCTGACCCCGCGCCATCAGGGCGGGCCGGTGTACTGGCTGGCCGAGGACGAAGACAG
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| Amino Acid Sequence |
>asparagine synthase
MCGLAGELRFDHQPADLAAVERITHHLAPRGPDAWGFHSQGPIALGHRRLKIMDLSDGSAQPMVDNQLGLSLAFNGAIYNFPELRAELEAKGYAFYSGGD TEVLLKGYHAWGADLLPKLNGMFAFAIWERDAQRLFIARDRLGVKPLYLSRTGQRLRFASALPALLKGGDINPLLDPVALNHYLNFHAVVPAPRTLLAGI EKLPPATWMRIEADGRTEQQTWWTLPYGPRADETNLTLEDWRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSLLVGLLREVGVDNLSTFSIGFEDAGG ERGDEFQYSDLIARHYGTRHHQLRIDEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVAKHCKVVQSGQGADELFAGYHWYPQVDGASDPYAAYRAAF FDRSYDDYAATVQPQWLTANDAAGDFVREHFAQPGADAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRLVELSARVPARFKLPDGGKQV LKEAARLVIPSEVIDRKKGYFPVPGLKHLQGATLDWVRELLLDPSQDRGLFKPAMLDRLLTDPQGQLTPLRGSKLWQLAALNLWLSEQGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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