Pseudomonas protegens Pf-5, PFL_4312 (pheA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGAAGAATATCGGCCCCAGCGGCATCCTGGTGAACATCATTCGCGAAGACCTGCTGGGGCGTGCCCGTTCGCTGTGCCCGACCATGCTCGACTACAAGG TCGCGGCGGACAACGGCTCGATGTACAACACGCCGCCGACCCTGGCCTGGTATTTGTCCGGCCTGGTGTTCGAATGGCTCAAGGAGCAGGGCGGGGTTGA AGCCATCGCCAAGCTCAATGAGGCCAAGCAGCGCACCCTGTACGATTTCATCGACGCCAGCGGCCTGTACAGCAACCCGATCAACAAGACCGACCGCTCC TGGATGAACGTACCGTTCCGTCTGGCCGACGATCGCCTGGACAAACCGTTCCTGGTGGGCGCCGAGGCTCGCGGCCTGTTGAACCTCAAGGGCCACCGCT CGGTGGGTGGCATGCGCGCTTCCATCTACAACGCCGTGGACATCAACGCAGTCAATGCGCTGGTGGCCTACATGGCGGAGTTCGAGAAGGAACACGGCTG
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| DNA Sequence for Gene |
>PFL_4312
|pheA
ATGTCTGAGCAAGAACTCAAGGCCCTGCGCCTGCGTATTGACGCCCTGGACGAGAAGGTCCTGGAGCTGATCAGTGAGCGCGCGCGCTGTGCCCAGGAAG TGGCGCGGGTCAAGATGGGCTCCCTCGCCGAAGGCGAAGTACCGGTGTTCTATCGTCCCGAGCGTGAAGCCCAGGTGCTCAAGCGGGTGATGGAGCGCAA CCAGGGGCCGCTGGGCAATGAAGAGATGGCGCGTTTGTTCCGCGAAATCATGTCTTCGTGCCTGGCCCTGGAGCAGCCATTGAAAGTGGCCTACCTCGGT CCTGAAGGTACCTTCACCCAAGCCGCGGCCATGAAGCACTTCGGTCATGCGGTGATCAGCAAGCCGATGGCGGCGATCGACGAGGTGTTCCGTGAAGTGG CGGCCGGCGCCGTGAACTTCGGCGTGGTGCCGGTGGAAAACTCCACCGAGGGTGCGGTGAACCACACTCTCGACAGCTTCCTCGAGCACGACATGGTGAT CTGCGGTGAAGTCGAACTGCGCATTCACCATCATCTGCTGGTGGGCGAGAACACCAAGACCGACAGCATCAGTCGCATCTATTCCCATGCCCAGTCCCTG GCCCAGTGCCGCAAGTGGCTGGACGCCCATTACCCGAATGTCGAGCGCGTGGCGGTGTCCAGCAACGCCGAGGCGGCCAAGCGGGTCAAGGGCGAGTGGA ATTCGGCGGCGATCGCCGGCGACATGGCGGCAGGCCTGTATGGCCTGACGCGCCTGGCAGAGAAAATCGAGGATCGTCCGGACAACTCCACGCGCTTTTT GATGATCGGTAATCAGGAAGTGCCGCCGACCGGCGACGACAAGACCTCGATCATCGTGTCCATGAGCAACAAGCCCGGTGCCTTGCACGAGCTGTTGGTG CCATTCCACGACAATGGCATCGACCTGACGCGAATCGAGACCCGACCTTCGCGCAGTGGTAAATGGACCTATGTGTTCTTCATCGACTTCGTCGGCCACC ACCGTGATCCGTTGGTCAAGGGTGTGCTGGAAAAGATCAGTCAGGAAGCAGTAGCACTCAAGGTGCTGGGTTCCTACCCGAAAGCGGTTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTTTAACAATGAGTGGCGACTTCCTCGCACTGGCACAACCAGGCGTGCAACAACTTTCGCCTTACGTTCCGGGCAAGCCCGTGGACGAACTGGCCCGT GAGCTGGACATCGATCCGGCCACCATCGTCAAGCTGGCGAGCAATGAAAACCCGCTGGGCGCCAGCCCCAAGGCCCTGGCGGCGATTCGTGACGAGCTTG CCGAGCTGACCCGTTATCCGGATGGCAACGGTTTTGCCCTCAAGTCCCTGCTGGCCGAGCGCTGCGGTGTGGAAATCGACCAGGTGACCCTGGGCAACGG TTCCAACGACATTCTGGAGCTGGTGGCTCGTGCCTACCTGGCGCCTGGCTTGAATGCGGTGTTCAGCGAGCACGCATTTGCCGTCTACCCCATCGTTACC CAGGCTGTCGGAGCCCAGGCTCGCGTGGTTCCGGCCAAGAACTGGGGGCATGACCTGCCAGCCATGCTCAAGGCGATCGATGATCGGACCCGCGTGGTGT
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| Amino Acid Sequence |
>chorismate mutase
MSEQELKALRLRIDALDEKVLELISERARCAQEVARVKMGSLAEGEVPVFYRPEREAQVLKRVMERNQGPLGNEEMARLFREIMSSCLALEQPLKVAYLG PEGTFTQAAAMKHFGHAVISKPMAAIDEVFREVAAGAVNFGVVPVENSTEGAVNHTLDSFLEHDMVICGEVELRIHHHLLVGENTKTDSISRIYSHAQSL AQCRKWLDAHYPNVERVAVSSNAEAAKRVKGEWNSAAIAGDMAAGLYGLTRLAEKIEDRPDNSTRFLMIGNQEVPPTGDDKTSIIVSMSNKPGALHELLV PFHDNGIDLTRIETRPSRSGKWTYVFFIDFVGHHRDPLVKGVLEKISQEAVALKVLGSYPKAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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