Pseudomonas protegens Pf-5, PFL_4230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4230
Name
Replicon chromosome
Genomic location 4919027 - 4920235 (- strand)

Cross-References

RefSeq YP_261322.2
GI 346643125
Entrez 3477356
INSDC AAY93486.2
NCBI Locus Tag PFL_4230
UniParc UPI000219FFC7
UniProtKB Acc Q4K8W1
UniProtKB ID Q4K8W1_PSEF5
UniRef100 UniRef100_Q4K8W1
UniRef50 UniRef50_U2WSR0
UniRef90 UniRef90_Q4K8W1

Product

Feature Type CDS
Coding Frame 1
Product Name
ammonium transporter
Synonyms
Evidence for Translation
Charge (pH 7) 0.96
Kyte-Doolittle Hydrophobicity Value 0.865
Molecular Weight (kDa) 42.0
Isoelectric Point (pI) 7.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 531 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002548 (480 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4230

Human Homologs

References

No references are associated with this feature.