Pseudomonas protegens Pf-5, PFL_4086 (pvdP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4086
Name
pvdP
Replicon chromosome
Genomic location 4714089 - 4715717 (- strand)

Cross-References

RefSeq YP_261183.2
GI 346643109
Entrez 3476387
INSDC AAY93347.2
NCBI Locus Tag PFL_4086
UniParc UPI000219FF9B
UniProtKB Acc Q4K9A0
UniProtKB ID Q4K9A0_PSEF5
UniRef100 UniRef100_Q4K9A0
UniRef50 UniRef50_Q4K9A0
UniRef90 UniRef90_Q4K9A0

Product

Feature Type CDS
Coding Frame 1
Product Name
chromophore maturation protein PvdP
Synonyms
Evidence for Translation
Charge (pH 7) 2.92
Kyte-Doolittle Hydrophobicity Value -0.510
Molecular Weight (kDa) 61657.3
Isoelectric Point (pI) 7.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003135 (466 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4086
Search term: pvdP

Human Homologs

References

No references are associated with this feature.