Pseudomonas protegens Pf-5, PFL_3909 (nuoN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGCCCACGGTGTTTCGGCAGCCGCGCTGTTTATCCTCAGCGGCCAGCTGTACGAGCGCACCCATACCCGCGACATGCGTGAAATGGGCGGCCTGTGG TCGCGTATCGCCTACCTGCCGGCCATCAGCCTGTTCTTCGCAGCCGCCTCCCTGGGCCTGCCGGGCACCGGCAACTTCGTCGGCGAGTTCCTGATCCTGA TCGGCACCTTCGTCAGCGCTCCATGGATCACCGCGATCGCGACTTCGGGCCTGGTGTTCGGCTCGGTCTACTCGCTGATCATGATCCACCGTGCCTACTT CGGCCCGTCCAAGTCGGACGCGGTACTGCACGGAATGGATGCTCGCGAACTGATCATGGTGCTGGGGCTGGCGGTACTGCTGATCTACATCGGCGTTTAC CCGCAACCGTTCCTCGATACCTCTGCCGCCACCATGCATGGCGTGCAGCAATGGCTCAGCACCGCCTTCACTCAACTCGCTTCGGCCCGGTAAGAGCGCT
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| DNA Sequence for Gene |
>PFL_3909
|nuoN
ATGGACTTTACGATTCAACACTTTATAGCCCTGGCGCCGCTGCTGATCACCAGCGCCACCCTTGTGGTGGTGATGCTGGCGATCGCCTGGCGGCGCAACC ACGCCCAGACCTTCCTGCTATCGGTGGCCGGTCTGAACCTGGCATTGCTGTCGATCTTCCCGGTGCTGAAAGTGGCACCGCTGGCGGTCACCCCGCTGTT GCAGATCGACCAGTTCGCCTGCCTCTACATGGCCCTGATCCTGGTGGCCACCCTGGCCTGCGTCACCCTGGCCCACGCCTACCTGGGCGATGGCAGTAGC GGTTACCCGGGCAACCGTGAAGAGCTGTACCTGCTGATCCTGCTGGCCGCCGCTGGTGGCCTGGTACTGGTCAGCGCGCAGAACCTGGCCGGCCTGTTCA TCGGCCTGGAACTGCTCTCGGTACCGGTCTACGGCCTGGTGGCCTATGCCTTCTTCAACAAGCGCTCCCTGGAGGCCGGCATCAAGTACATGGTGCTGTC GGCCGCCGGTTCGGGCTTCCTGTTGTTCGGCATGGCCCTGCTCTACGCAGAAGCCGGCAGCCTCAGCTTCAGCGGTATCGGCCAGGCCCTGGCCGCCACT GGGCTGCCAAGCCCGCTGGCGCAACTGGGCCTGGGCATGATGCTGATCGGCCTGGCCTTCAAACTGTCGCTGGTGCCTTTCCACCTGTGGACTCCGGACG TCTACGAAGGCGCCCCGGCCCCGGTCGCCGCCTTCCTGGCCACCGCCAGCAAGGTGGCGGTGTTCGCGGTACTGGTGCGTCTGTTCCAGCTCTCGCCAGT GGCCAGCAGCGGTGTCCTGAGCAACGTGCTGACCGTGATCGCCATCGCCTCGATCCTGGTGGGCAACCTGTTGGCGCTGACCCAGAGCAACCTCAAGCGT CTGCTGGGTTACTCCTCCATCGCCCACTTCGGTTACCTGCTGATCGCCCTGGTGGCGAGCAAGGGCCTGGCCATGGAAGCCATCGGCGTGTACCTGGTCA CCTACGTGATCACCAGCCTGGGCGCCTTCGGCGTGATCACCCTGATGTCCTCGCCGTACAAGGGCCGTGACGCCGACGCACTGTACGAGTACCGCGGCCT GTTCTGGCGCCGTCCGTACCTGACGGCCGTCCTCACCGTGATGATGCTGTCCCTGGCCGGTATCCCGCTGACCGCAGGCTTCATCGGCAAGTTCTACATC ATCGCTACCGGTGTCGAAGCGCACCAATGGTGGCTGGTCGGTTCCCTGGTCATGGGCAGCGCCATCGGCGTCTTCTACTACCTGCGAGTGATGGTCACCC TTTACCTGATCGAGCCGAACCTGCGTCGCGTCGATGCCCAACTGCACTGGGAACAGAAAGCCGGTGGCGTCATGCTGCTGGCCATCGCGCTCCTGGCGTT CTTCCTCGGCGTATACCCACAGCCGCTGCTGACCCTGGTCCAGCACTCCGGCCTGGCGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCTTAGGTTTCAACGCAACAAACAGAACGGCACCTTCGGGTGCCGTTTTGCATTTCAGGGCCCTACCCTCCCCTCTTCCCAGCGAAACTCGGAATCGC CCTTCCTGTCACGTCGGCCCGGTCCGACATTCAGCCCACTGCCGCAGACATAGACTGTTGCCAGATCAAACGCGGCGCTCAGCGGGCCTTGACCAAAGCT GCAGCGTCATCCAGTCTATACGCAGGAAGCGTATGAAATGAATGCTCTGTTTATTGAACTACCGGCATTTGCGCGATACCGAAAAGGCTTCCTTGACGAC GAGTTGTTCTGCGAACTGCAGATCGAGTTGCTGCGTCACCCGCACGCGGGTGTTCTGATTCAGGGCACTGGCGGCTTGCGCAAGATGCGTTTCGTCGATG AGCGACGCAACAAGGGCAGGCGTGGCGGGCTGAGGGTGATTTATTACTGGTGGTCCGGAGGAGCACAGTTCTGGCTCTTCACCCTGTTCGACAAGGAGCA
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| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MDFTIQHFIALAPLLITSATLVVVMLAIAWRRNHAQTFLLSVAGLNLALLSIFPVLKVAPLAVTPLLQIDQFACLYMALILVATLACVTLAHAYLGDGSS GYPGNREELYLLILLAAAGGLVLVSAQNLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSGFLLFGMALLYAEAGSLSFSGIGQALAAT GLPSPLAQLGLGMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVLVRLFQLSPVASSGVLSNVLTVIAIASILVGNLLALTQSNLKR LLGYSSIAHFGYLLIALVASKGLAMEAIGVYLVTYVITSLGAFGVITLMSSPYKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI IATGVEAHQWWLVGSLVMGSAIGVFYYLRVMVTLYLIEPNLRRVDAQLHWEQKAGGVMLLAIALLAFFLGVYPQPLLTLVQHSGLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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