Pseudomonas protegens Pf-5, PFL_3873

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3873
Name
Replicon chromosome
Genomic location 4470208 - 4471209 (+ strand)

Cross-References

RefSeq YP_260973.1
GI 70731232
Entrez 3478257
INSDC AAY93137.1
NCBI Locus Tag PFL_3873
UniParc UPI000054DA20
UniProtKB Acc Q4K9W0
UniProtKB ID Q4K9W0_PSEF5
UniRef100 UniRef100_Q4K9W0
UniRef50 UniRef50_D7I1C2
UniRef90 UniRef90_Q4K9W0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.44
Kyte-Doolittle Hydrophobicity Value -0.246
Molecular Weight (kDa) 36783.7
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 425 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002942 (486 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3873

Human Homologs

References

No references are associated with this feature.