Pseudomonas protegens Pf-5, PFL_3806 (rpmJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01022
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01022
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01022
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF57840 Ribosomal protein L36 IPR035977 Large ribosomal subunit protein bL36 superfamily 1 41 7.72E-15
Pfam PF00444 Ribosomal protein L36 IPR000473 Large ribosomal subunit protein bL36 1 41 2.1E-18
NCBIfam TIGR01022 JCVI: 50S ribosomal protein L36 IPR000473 Large ribosomal subunit protein bL36 1 41 3.0E-9
Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. IPR000473 Large ribosomal subunit protein bL36 1 41 18.32962
PANTHER PTHR47781 50S RIBOSOMAL PROTEIN L36 2 IPR047621 Ribosomal protein L36, bacteria 1 46 1.7E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.