Pseudomonas protegens Pf-5, PFL_3372 (hpaE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TGGCGGTGATCGGCAAGACCGCGCGCAACGTCAAGCGCGAGGATGCCCTGGACTACCTGGCCGGCTACACCCTGTGCAACGACTATGCGATCCGCGACTA CCTGGAGAACTACTACCGGCCCAACCTGCGGGTGAAGAACCGCGACGCCACCACCCCGCTAGGCCCGTGGATCATCGACGCGGCCCAGGTACCCGAACCC AACAACCTGACCCTGCGCACCTGGGTCAACGGCGAGTTGCGCCAGCAAGGCAGCACCGCCGACATGATCTTCGACATCCCCTACCTGATCGAATACCTGT CCGGCTTCATGACCCTGCAACCGGGGGACATGATCGCCACCGGCACCCCCGAAGGCCTGTCCGACGTGGTGCCCGGCGATGAGGTGGTGGTGGAAATCGA AGGCATCGGCCGGCTGGTCAACCGCATCGTCAGCGAAAGCGAATTCTTCACCCATCACGCCCACCCGGAGCCCACTGCCGTGGCCAAGGAGCACGCATAA
DNA Sequence for Gene
>PFL_3372 |hpaE
ATGATCAAGCACTGGATCAACGGCCGCGAAGTCGAAAGCCGCGAAGTGTTCACCAACTACAACCCCGCCACCGGTGAAGCCATTGGCGAGGTGGCCAGCG GCGGCGCCGAGGAAATCGCCCAGGCGGTAGCGGCGGCCAAGGACGCCTTTCCGAAATGGGCCAATACCCCGGCATCGGTGCGCGCCCGGCTGATGCGCCG CCTGGGTGCGCTGATCGAAGAGAACGTGCCGCACCTGGCGGAGCTGGAAACCCTGGACACCGGCCTGCCGATCCACCAGACCCGCAACGTGCTGATTCCC CGGGCCTCCCACAACTTCGATTTCTTCGCCGAGGTCTGCACCCGCATGGATGGCCACAGCTATCCGGTGGACGACCAGATGCTCAACTACACCCTGTACC AGCCGGTGGGCGTCTGCGCCCTGGTGTCGCCATGGAACGTGCCGTTCATGACCGCCACCTGGAAGACCGCGCCGTGCCTGGCCCTGGGCAATACCGCGGT GCTGAAGATGAGCGAACTGTCGCCGCTGACCGCCAATGAGCTGGGCCGGCTGGCGGTGGAAGCCGGGATTCCCGCCGGGGTGCTGAACATCGTCCAGGGC TACGGTGCCACCGCCGGCGATGCCCTGGTACGCCACCCGGACGTGCGGGCGATTTCCTTCACCGGCGGCACCGCCACCGGCAAGAAGATCATGCAGACCG CGGGCCTGAAGAAGTACTCCATGGAACTGGGCGGCAAGTCGCCGGTGCTGATCTTCGAGGACGCCGACCTGGAACGGGCCCTGGACGCCGCGCTGTTCAC CATCTTTTCCCTGAACGGCGAGCGCTGCACCGCCGGCAGCCGGATCTTCATCCAGGAAAGCGTCTACCCGCAGTTCGTCAAGGAGTTCGCCGCCCGGGCC AGGCGCCTGATCGTCGGTGACCCGCAGGACCCCAAGACCCAGGTCGGCTCGATGATCACCCAGGCCCACTACGACAAGGTCACCGGCTATATCCGCATCG GCCTGGAAGAAGGCGCGACCCTGCTGGCCGGCGGCCTGGAGCGCCCGGCCAACCTGCCGGCGCACCTGGCCCGCGGGCAGTTCATCCAGCCCACGGTGTT CGCCGACGTGGACAACCAGATGCGCATCGCCCAGGAAGAGATCTTCGGCCCGGTGGTGTGCCTGATCCCGTTCAAGGACGAGGCCCAGGCCCTGCAACTG GCCAACGACACCGAGTACGGCCTGGCCTCCTACATCTGGACCCAGGACATCGGCAAGGCCCATCGCCTGGCCCGTGGCATCGAGGCCGGCATGGTGTTCA TCAACAGCCAGAACGTGCGCGACCTGCGCCAGCCCTTCGGCGGCATCAAGGGTTCGGGCACCGGTCGCGAAGGCGGCGAATACAGCTTCGAGGTCTTTGC CGAGATCAAGAACGTCTGCCTCTCCATGGGCAGCCACCACATACCGCGCTGGGGCGTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTTCAGAACCGTCCCGGATCACCCCAACAAGAAGATGTTTCAGGAGAAGCACCATGGGCGAAGTCGTCATGGCCGCCAAGGTCTGCCACGTACCATCGA TGTACCTGTCCGAACTGCCGGGCAAACACCACGGCTGCCGTGAGGCGGCCATTGCCGGGCACAAGGAGATCGCCCGCCGGGCCCGGGAGCTGGGGGCAGA CACCGCAGTGGTGTTCGATGTGCACTGGCTGGTCAACAGCGGGTACCACATCAACTGCGGCGAGGCGTTCAACGGCACCTACACCAGCAACGAGCTGCCG CACTTCATCAAGAACATGACCTACGACTACCAGGGCTGCACGGAGCTGGGTGAGCTGATCGCCGCCGAGGCCAATGCCGCCGACGTGCGCACCCTGGCCC ACAACATTCCCAGCCTGGAACTGGAGTACGGCACCCTGGTGCCCATGCGCTACATGCACATGGACGTGCCCGCTGCCGAGCACTTGAAGGTGGTGTCCAT
Amino Acid Sequence
>5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
MIKHWINGREVESREVFTNYNPATGEAIGEVASGGAEEIAQAVAAAKDAFPKWANTPASVRARLMRRLGALIEENVPHLAELETLDTGLPIHQTRNVLIP RASHNFDFFAEVCTRMDGHSYPVDDQMLNYTLYQPVGVCALVSPWNVPFMTATWKTAPCLALGNTAVLKMSELSPLTANELGRLAVEAGIPAGVLNIVQG YGATAGDALVRHPDVRAISFTGGTATGKKIMQTAGLKKYSMELGGKSPVLIFEDADLERALDAALFTIFSLNGERCTAGSRIFIQESVYPQFVKEFAARA RRLIVGDPQDPKTQVGSMITQAHYDKVTGYIRIGLEEGATLLAGGLERPANLPAHLARGQFIQPTVFADVDNQMRIAQEEIFGPVVCLIPFKDEAQALQL ANDTEYGLASYIWTQDIGKAHRLARGIEAGMVFINSQNVRDLRQPFGGIKGSGTGREGGEYSFEVFAEIKNVCLSMGSHHIPRWGV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site