Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCTACCTGCCCTCCGGCTCCCGCGACCTCAAGGACCCGGTGCTCAACCAGTACCTCGGTACCTACTGCCGGGGCTCCGGGGGCATGGGCCACGAGGAGCG GATCAAGATCCTCAAGCTGCTGTGGGACGCCATCGGCACCGAATTCGGCGGCCGCCACGAGTTGTACGAGATCAACTACGCCGGCAGCCAGGACGAGATC CGCATGCAGTGCCTACGCCACGCCCAGGCCAGCGGCTCGATGAAAGCCATGACCGACCTGGTGGACAAGTGCCTGGGGGACTACGACCTCGACGGCTGGA CCGTGCCGCACCTGAGCAACCCGGATGACATCAACATGCTGGACCGCATCCGCCAATAGCCCACGCCACATGCAGGAGCGGGCTTGTGCAGGCGCTGGCT TGCCAGCGAAAACGCCCGCCAGAGCGCCACAAGGCTCAGGCCCCTTCGTCGGCAAGCCGGCTCCTGCAGCGCAATGCCCTGCGTCCACGAGGAATTCGTC
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DNA Sequence for Gene |
>PFL_3357
|hpaC
ATGTCTGTACTCGACCCCAAGCAACTCGCCTTTCGCAACGCCATGGCGCACATGACCGCAGCGGTCAACGTCATCACCAGCAACGGCCCCGCCGGCCGCT GCGGCATCACCGCCACGGCGGTCTGCTCGGTCACTGACAGCCCGCCGACCCTGATGGTCTGCGTCAACCGCAACAGCGCCCTGAACCCGGTGTTCAAGGG CAACGGGCGGTTGTGCGTCAACGTCCTCAGCGGCGAACACGAAGAAGTGGCCCGGCACTTTGCCGGCATGACCGGCGTGGCCATGGACCAGCGCTTCGGC CTGCACCCCTGGCGCGACGGCCTGCAGGCCCTGCCGGTGCTGGAGGGCGCCCTGGCCAGCCTGCAGGGGCGCATCACCGAGGTCCAGGAAATCGGCACGC ACTCGGTAATGCTGGTGGAACTGGATGAAATCGGCGTGCTGGAGCACGGCGACTCACTGGTGTACTTCAGCCGTTGCTTCCATCGCCTGGCCCACCCTTG CCGGGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCCTTCCCTCCTGGCCGTCATTTCCCGCGCCTGGATGCCCGCCGGCATCCGGGCCAAGGGCCACCTCCTGCATCTGTAGGATGGCGCGGCTCTTCCAAG CCATCGATACTCGAACCAGGCCCTGCCCACGTCCCCTGACGTACCGGTCCCAAACCCCTTCCGTGACGAAAACAATAACAACGTCGCACAGAGGTACAGA CCCATGAACCACCCCGAGCGTGCCCCGGCCAGCCTGTTGCAGGCCTTCAGCGAACTGACCCTTGAACTGCAGCAACTGGCGCAGAACAGGGACATCGAAA ACCTGCACCAGCATGCACTGGCGCGCATCAGCAGGCTCCTGCCTTTCGACAGCGCCTGGTGGGGCCGTGCCGCACTGGTGGATGGCCTGCCGGATGAACA CAGCTGCTACCTGTACCGCCTGCCACCGAGCTACCTGCCGGACTGGCAATCGATCCGCCACATCGATGTCACGGTGAGCCGGGTCCACGAGGTGCCGGGC
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Amino Acid Sequence |
>4-hydroxyphenylacetate 3-monooxygenase, reductase component
MSVLDPKQLAFRNAMAHMTAAVNVITSNGPAGRCGITATAVCSVTDSPPTLMVCVNRNSALNPVFKGNGRLCVNVLSGEHEEVARHFAGMTGVAMDQRFG LHPWRDGLQALPVLEGALASLQGRITEVQEIGTHSVMLVELDEIGVLEHGDSLVYFSRCFHRLAHPCRAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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