Pseudomonas protegens Pf-5, PFL_3199

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0036297 interstrand cross-link repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR15749
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016788 hydrolase activity, acting on ester bonds
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08774
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004518 nuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR15749
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.1350.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF18081 Fanconi anemia-associated nuclease SAP domain IPR040603 Fanconi-associated nuclease 1, SAP domain 95 143 5.9E-12
FunFam G3DSA:3.40.1350.10:FF:000024 Fanconi-associated nuclease - - 472 546 3.5E-32
Gene3D G3DSA:3.40.1350.10 - IPR011856 tRNA endonuclease-like domain superfamily 472 544 2.4E-8
Pfam PF08774 VRR-NUC domain IPR014883 VRR-NUC domain 432 543 9.8E-37
PANTHER PTHR15749 FANCONI-ASSOCIATED NUCLEASE 1 IPR033315 Fanconi-associated nuclease 1-like 8 207 1.2E-62
SMART SM00990 VRR_NUC_a_2 IPR014883 VRR-NUC domain 429 543 1.9E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.