Pseudomonas protegens Pf-5, PFL_2834 (ccoN_3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2834
Name
ccoN_3
Replicon chromosome
Genomic location 3157117 - 3158544 (- strand)

Cross-References

RefSeq YP_259940.1
GI 70730201
EC Number 1.9.3.1
Entrez 3478003
INSDC AAY92106.1
NCBI Locus Tag PFL_2834
UniParc UPI000054D61F
UniProtKB Acc Q4KCU3
UniProtKB ID Q4KCU3_PSEF5
UniRef100 UniRef100_Q4KCU3
UniRef50 UniRef50_Q03073
UniRef90 UniRef90_Q4KCU3

Product

Feature Type CDS
Coding Frame 1
Product Name
cbb3-type cytochrome c oxidase subunit I
Synonyms
Evidence for Translation
Charge (pH 7) 10.79
Kyte-Doolittle Hydrophobicity Value 0.572
Molecular Weight (kDa) 53.6
Isoelectric Point (pI) 9.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001566 (1638 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2834
Search term: ccoN_3

Human Homologs

References

No references are associated with this feature.