Pseudomonas protegens Pf-5, PFL_2751 (gspI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02501
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02501
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02501 Type II secretion system (T2SS), protein I IPR003413 Type II secretion system protein GspI, C-terminal 43 120 3.6E-14
NCBIfam TIGR02532 JCVI: prepilin-type N-terminal cleavage/methylation domain IPR012902 Prokaryotic N-terminal methylation site 7 30 1.7E-8
Gene3D G3DSA:3.30.1300.30 - - - 38 121 8.4E-8
NCBIfam TIGR01707 JCVI: type II secretion system minor pseudopilin GspI IPR010052 Type II secretion system protein GspI 9 105 1.8E-20
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 41 120 9.94E-10
Pfam PF07963 Prokaryotic N-terminal methylation motif IPR012902 Prokaryotic N-terminal methylation site 5 29 7.5E-11
PANTHER PTHR38779 TYPE II SECRETION SYSTEM PROTEIN I-RELATED IPR010052 Type II secretion system protein GspI 1 120 2.0E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.