Pseudomonas protegens Pf-5, PFL_2663 (pfeA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCTGCCTGCTGGACGCCGAGTGCCGGGTCCAGGTGCACCTGGACAGCATCGCCCAGGCCCTGGAGAACCTGCTGCGCAATGCCATCCGCTACTCCCCCG CCGGCGGCCGGGTGAGCCTGCGCGGCTGGCGCGAAGGCGGCTATTGGCACCTGTGCCTGGAAGACCAGGGACCAGGGGTTGCCGAACAGGACCTGCAACG CATCTTCCAGCCCTACCAGCGCCTGGACTCGGCCCAGGGCGACGGCTTCGGCCTGGGCCTGGCCATCGCCCGGCGCGCCGTGGAGCTGCATCAGGGGCGG ATCTGGGCCAGCAACGGCCACCCCGGGCTGTGCATGCACCTGCTGCTACCCGCCGCCTAGGCCCGGCACAAGCGCGCCCGGCTCCCTGATAGAACCTCGT ACCGACCTGGAAGTGTTTAGAAAGTTAATGCGCTTTACTCGCAAATAGCAGTCATTATCATTCGTGATCTTCTGTTTCTGCCTCTGTCCGGAGATCACCG
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| DNA Sequence for Gene |
>PFL_2663
|pfeA
ATGTCCATGCGCTCGATGCGTCCTTTCGCCCCCTTCCTGCTGTCCGGCTGCTGCCTGCTCAGCCAGGCCGTGCAGGCCGCCAACGAAGGCTCGACCCAGC CGGTCCTGGAGCTGGAACCCCAGAGCGTCATCGCCACCGCCAAGGAAGAAACCAAGCAGGCACCGGGGGTCTCGGTGATCACCGCCGAGGACATCCAGAA GCGCCCGCCGGCCAACGACCTGTCGCAGATCATCCGCACCATGCCCGGGGTCAACCTCACCGGTAACTCCACCAGCGGCCAGCGCGGCAACAACCGGCAG ATCGACATCCGTGGCATGGGCCCGGAAAACACCCTGATCCTGGTGGACGGCAAGCCGGTGGGCAGCCGCAACTCGGTGCGCTACGGCTGGCGCGGCGAGC GTGACAGCCGCGGCGACACCAACTGGGTGCCGGCCGACCAGGTCGAACGCATCGAAGTGATCCGCGGCCCGGCGGCGGCCCGCTACGGCAACGGCGCCGC TGGCGGGGTGATCAACATCATCACCAAGCAGGCCGGCATCCAGACCCACGGCAATGCCACGATCTACAGCTCGTTCCCGACCCACAAGGACGAAGGCGCC ACCCAACGCATGAGCTTCGGCCTCAACGGCCCGCTGACCGACAGCTTGAGCTACCGGGTCTACGGCAACGTGGCCAAGACCGATTCCGACGACGCCGACA TCAACGCCGGCCATGAATCCCTGCGCACCGGCAACCAGGTCGGCACCCTGCCCGCCGGCCGCGAAGGGGGACGCAACAAGGACCTCAACGGCCTCTTGAG CTGGCACCTGACCCCGGACCAGAGCCTGGACTTCGAAGCCGGCTTCAGCCGCCAGGGCAACATCTACACCGGCGATACCCAGAACACCAACAGCAACAGC ACGGTGAAAAACCTGCTGGGCCACGAGACCAACCGCAGCTACCGCGAGACCTATTCGGTGACCCATCGTGGCGAATGGGACTTCGGCAGTTCCATGGCCT ACCTGCAATACGAAAAGACCCGCAACACGCGGATCAACGAAGGCCTGGCCGGCGGCACCGAAGGCATCTTCAGCAACAGCGAGTTCTACACCGCGGTGCT GCGCGACCTGACCGCCCATGTCGAGGTCAACCTGCCCCTGCGCGCCGGCTTCGAGCAGACCCTGACCCTGGGCAGCGAATGGTCCCAGCAAAAGCTCGAC GACCCCAGCGCCAACACCCAGAGCACCAGCGAAGGCGGCGCCGTGGGCGGCCTGAGCTCAAGCAACCGCAGCACCCAGTCCAGCGCGCAGATCTTCTCGC TGTTCGCTGAAGACAACATCGAACTGCAGCCGGGCACCATGCTCACCCCGGGCCTGCGTTTGGACCACCACAGCATCGTCGGCGACAACTGGAGCCCGTC CCTCAACCTGTCCCACGCCCTGAGCGACACCCTGACCCTCAAGGCCGGCATCGCCCGGGCCTACAAGGCGCCGAACCTGTACCAGCTCAACTCCGACTAC CTGCTCTACAGCCGCGGCCAGGGCTGCTATGGCCAGAGCACCAGCTGCTACCTGCAGGGCAACGACAAGCTCAAGGCGGAAACCAGCGTCAACAAGGAAC TGGGCCTGGAATACAAGGCCGACGGCTGGGTGGCCGGCCTGACCTACTTCCGCAACGACTACAAGAACAAGGTGGAATCCGGCCTGGCGCCGGTGAGCCG TGCCAGCGGCGGCAGCGGCGCTTACCGCAACTCGGCGATCTACCAGTGGGAAAACGTGCCCAAGGCCCTGGTGGAAGGCCTGGAAGGCACCCTGACCATT CCGTTGGCCAGCCAGCTGACCTGGAACAACAACTTCACCTACATGCTGCAATCGAAGAACAAGGAAACCGGCGACTACCTCTCGGTGACCCCGCGCTACA CCCTCAACTCGATGCTCGACTGGCAGGCCACCCAGGATCTGTCGCTGCAGGCGACCGTGGCCTGGTACGGCCAGCAGACGCCGAAGAAGTACGACTACCA CGGCGACCGCGTCACCGGCAGCGCCACCCAGCAACTGGCGCCGTACGCCATTGCCGGGGTCAGCGGCACCTACGCCCTGACCCGCAACCTGAGCCTGACC GCCGGGGTCGACAACCTGTTCGACAAACGCCTGTTCCGTGAAGGCAATGCCCAGGGCGTGAACAACATCGCCGGGGCCGGCGCCGCCACCTACAACGAAC CCGGGCGCACCCTGTACACCAGCCTGACCGCTTCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCATTAGCAAGAGCCATCACCAAGAGCCTGCCGAGAACGCCTGATGAGAACTTTTTTCCTGCCCCTGGCCCTGGCCTGGGGCCTTGCGGGAGCGGCCCT GGCCGCCCCCGCCCCGGACCAGCCCATGGACCGCAGCCTGCTGCAACGCCAGGACCTGCCCTACCGCTTCACTAGCCTGCAACTGGATTCCGCCGACGGC CAGCGGCACTACCAACTGTGGATCGGCAAGCCGTTGCAGGCGCCACCGCCACAGGGCTACCCGGTGCTGTGGATGCTCGATGGCAACGCCGCCATCGGCG CCCTCGACCCCGAGCAGCTCAAGCGCCTGGACCAGGGCCAGGCGCCGCTACTGGTGGCAGTGGGTTACCAGACCCCACTGCGTATCGAGCGCAACGCCCG CACCTATGACTACACCCCGCAGCAACCGGGCCAGGCGCAGCAGCAAGACCCGCTGACCGGGCAACCCAGCGGCGGCGCGCAAGCCTTCCTGCAACTGCTG
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| Amino Acid Sequence |
>outer membrane receptor FepA
MSMRSMRPFAPFLLSGCCLLSQAVQAANEGSTQPVLELEPQSVIATAKEETKQAPGVSVITAEDIQKRPPANDLSQIIRTMPGVNLTGNSTSGQRGNNRQ IDIRGMGPENTLILVDGKPVGSRNSVRYGWRGERDSRGDTNWVPADQVERIEVIRGPAAARYGNGAAGGVINIITKQAGIQTHGNATIYSSFPTHKDEGA TQRMSFGLNGPLTDSLSYRVYGNVAKTDSDDADINAGHESLRTGNQVGTLPAGREGGRNKDLNGLLSWHLTPDQSLDFEAGFSRQGNIYTGDTQNTNSNS TVKNLLGHETNRSYRETYSVTHRGEWDFGSSMAYLQYEKTRNTRINEGLAGGTEGIFSNSEFYTAVLRDLTAHVEVNLPLRAGFEQTLTLGSEWSQQKLD DPSANTQSTSEGGAVGGLSSSNRSTQSSAQIFSLFAEDNIELQPGTMLTPGLRLDHHSIVGDNWSPSLNLSHALSDTLTLKAGIARAYKAPNLYQLNSDY LLYSRGQGCYGQSTSCYLQGNDKLKAETSVNKELGLEYKADGWVAGLTYFRNDYKNKVESGLAPVSRASGGSGAYRNSAIYQWENVPKALVEGLEGTLTI PLASQLTWNNNFTYMLQSKNKETGDYLSVTPRYTLNSMLDWQATQDLSLQATVAWYGQQTPKKYDYHGDRVTGSATQQLAPYAIAGVSGTYALTRNLSLT AGVDNLFDKRLFREGNAQGVNNIAGAGAATYNEPGRTLYTSLTASF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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