Pseudomonas protegens Pf-5, PFL_2565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
ATGGGCCTTGCGCATCGGGCAATGCTCGCCGGCCTGATCGCAGGGCACGGCGAACTGGTGGGACACCCGGTAGCACTTGGCGCCCACGTGGGGCTTGCCG GCCACGCCGAACTGACGCTGGTAGGCGGTGTTGGCGGCGATGATGTTGTAGTCGGTGTCCAGCACTATGGTGGGTTGCTGGTCGTGTTCGAGGTAGGACA CCAGGGCGGACATCGGTGGCGGGACTAGGTCGGTGGCAATCAGGGACATGGGCAACTCCGGGGCAGAGGCGGCAGCTTAAAGCATGGGCGCCATCACTGC CATTTTCTGCCAGCAACTGCCAAATGACTGCCAACCCCGGGTGACAGTCCTGGCGACAACACATCACCAGGGGGCTGAAAAAGCGTCTAAACCAATGAAC AGGCGCCAAACGACGCCGTTTCGGGTTGGCACGCTTATTGACACTTCAAGAAACGAGCGTCAGCGCAGACTGCCCTCACCTTCATTGCCTGGAGTGCCCC
DNA Sequence for Gene
>PFL_2565
ATGATCATCAGCGACACGCTGCGTGTAGAAGCCTTTTTCGACAGCCATACCTGGACCATCAGCTACCTGGTGATGGACCTGGCCAGCCGCCACTGCGCAT TGATCGACAGCGTGCTGGACTACGACCCGAAATCCGGCCGCACCCACACCGAGTCCGCCGACCGCCTGATCGCCCGGGTGAAAGAGCTGGACGCCCGGGT CGACTGGATCCTGGAAACCCATGTGCATGCCGACCACCTGTCGGCCGCCGCCTACCTCAAGGCGCAGCTCGGGGCCCAGGTGGCCATCGGCAACCAGATC ACCCGGGTGCAGAAGACCTTCGGCGCGCTGTTCAACGAAGCCCCGGCCTTTGCCCGGGACGGCAGCCAGTTCGACGTGCTGCTCGAAGACGGCGCCGAAT TCGCCATCGGCGGCCTCACCGCGCGGGCCATGCACACCCCGGGGCATACCCCGGCCTGCATGACCTACCTGGTACAGGTCGGCGACGAAACCCTGGCCTT TGTCGGCGACACCCTGTTCATGCCCGACTACGGCACCGCCCGCTGCGACTTCCCCGGGGCCGACGCGCGGACCCTGTACCGCTCGATCGGCAAGATCCTC GCCCTGCCCCCCAGCACCCGGCTGTTCATGTGCCACGACTACCTGCCCAACGGCCGCGAGCTGCAGTACATGACCACCGTCGCCGAGCAGCGCGCCAACA ACATCCACATTCACCAGGGGGTCGACGAAGACAGCTTCGTGGCCATGCGCGAAGCCCGCGACGCGACCCTGGACATGCCGGTGCTGATCCTGCCTTCGGT GCAGGTCAACATGCGCAGCGGGCACTTCCCCGAGCCCGAGGACAACGGCGTGAGCTACCTGAAGATTCCCCTGAACACCCTATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTATTACCTACTCCACACGGAGACCTTGCCATGCGCCCCTTCAACCCGGCCCTGCCCACTGTCGACGGCAGCCACCAGGTGCTGATCGTCGGTGGCGGTG CCGCCGGCATCGCCGTTGCTGCCAGCCTCTTGACCCGCGATCCACACCTGGACGTGGCACTCATCGACCCTGCCCGGCACCACTATTACCAACCCGGCTG GACCCTGGTGGGCGCCGGAGTATTCAGCGCCCAATCCACCGAGCGCGCCATGGCCGAGCTGATGCCCCAAGGGGTCAAGTGGATCCAGGACGCGGTCAGC CGCTTCGACCCGGAACACAACGCCCTCGTGCTGGAGGACGGCCGGGTGCTGGCCTATGACCAACTGATCGTCTGCCCCGGGCTCAAGCTCGACTGGGCCG CCATCGACGGCCTGCCCCAGGCCCTGGGCAACCACGGCGTGACCTCCAACTACCGCTACGACCTGGCGCCCTACACCTGGCAACTGGTGCAGCAACTGCA
Amino Acid Sequence
>metallo-beta-lactamase domain-containing protein
MIISDTLRVEAFFDSHTWTISYLVMDLASRHCALIDSVLDYDPKSGRTHTESADRLIARVKELDARVDWILETHVHADHLSAAAYLKAQLGAQVAIGNQI TRVQKTFGALFNEAPAFARDGSQFDVLLEDGAEFAIGGLTARAMHTPGHTPACMTYLVQVGDETLAFVGDTLFMPDYGTARCDFPGADARTLYRSIGKIL ALPPSTRLFMCHDYLPNGRELQYMTTVAEQRANNIHIHQGVDEDSFVAMREARDATLDMPVLILPSVQVNMRSGHFPEPEDNGVSYLKIPLNTL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site