Pseudomonas protegens Pf-5, PFL_2548 (hydA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACTCAATAAAGGTGCCAACTACTGCCGGATACGCGACTGCACAGTGTGCGGAATCCATGTAAACAACTGATGTCATTGGGTTTTATGCAAGCAACTTTCA AGCCCCTGGTTAGTTGCCAATCAACTCAGGCCGGGTGTTTGGCAAGTTGTCCATTCGTTCAGGACCCAAAGCAGTGCACGGTTATTTTCTTAGTCATTTA TCGGTCTTCCCAGCGCCTCCTCAAGCAGCTGATTTGACATAGGAAATCTCGACTATTTTTTGATCCTGTCAAGTGCGTCAAAATGGTGAGAGGCTGCACC ATTTTGCAGATTTGAACTTTTAATCGTTATATTTCAATAAGTTATATTGAATATAAGCTTATAAAAAATATTCTTGATGTTTCTTTGAAGTGCGACTAGC TTCTAATCCTGTCACCGATGACAGGATTGTTTAAGTTATCAGTGCGTTCAATAAAAAGTTAGAACCGACAGCAGTCGGTCATGCCTGCGAGGAACTCGGA
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| DNA Sequence for Gene |
>PFL_2548
|hydA
ATGTCTCTGTTGATCCGTGGCGCCACCGTTATTACCCATGATGAAAGTTACAAGGCCGATGTACTCTGCGCAGAGGGTGTGATTCGCGCCATCGGCAACA ATCTGGATGTTCCCACCGGTTGTGAAGTGCTCGACGGCAGCGGCCAATACTTGATGCCCGGCGGCATCGATCCCCATACCCACATGCAACTGCCGTTCAT GGGCACCGTGGCCAGCGAAGACTTCTTCAGCGGCACGGCGGCGGGCCTGGCGGGGGGCACCACCTCGATCATCGACTTCGTGATTCCCAACCCCCAGCAG TCGTTGCTGGAGGCCTTCCAGCAGTGGCGCGGCTGGGCGGAAAAATCCGCCAGCGACTACGGCTTCCACGTGGCCATCACCTGGTGGAGCGAGCAGGTGC GCGAGGAAATGGCCGAGCTGGTGCAGCACCACGGCATCAACAGCTTCAAGCACTTCATGGCCTACAAGAACGCCATCATGGCCGCCGACGACACCCTGGT GGCGAGCTTCGAGCGCTGCCTGGAACTGGGGGCGGTACCCACGGTACACGCGGAAAACGGCGAGCTGGTGTATCACCTGCAACGCAAGCTGCTGGCCCAG GGCATTACCGGGCCGGAAGCCCACCCGTTGTCGCGGCCTTCGCAAGTCGAAGGCGAAGCCGCCAGCCGGGCCATTCGCATCGCCGAGACCCTGGGCACGC CGCTGTACCTGGTGCACGTCTCGACCCAGGAAGCCCTGGACGAAATCAGCTATGCCCGGGGCAAGGGCCAGCCGGTCTACGGTGAAGTGCTGGCCGGGCA CCTGCTGCTGGACGACAGCGTGTACCGCGACCCGGACTGGCAGACCGCCGCAGGTTACGTCATGAGCCCGCCCTTCCGCCCCCGTGGCCATCAGGAGGCC CTGTGGCGCGGCCTGCAATCGGGCAACCTGCACACCACCGCCACCGACCACTGCTGCTTCTGCGCCGAACAGAAAGCCGCCGGCCGCGATGATTTCAGCA AGATCCCCAACGGCACCGCCGGCATCGAGGACCGCATGGCGGTGCTGTGGGATGAAGGGGTGAATACCGGGCGCCTGTCGATGCAGGAATTCGTCGCCCT GACCTCCACCAACACCGCGAAGATCTTCAACCTCTACCCGCGCAAGGGCGCGATCCGCGTCGGCGCCGACGCCGACCTGGTGCTCTGGGACCCGCAAGGC AGCCGCACCATTTCCGCCAAGACCCACCACCAGCAGGTGGACTTCAACATCTTCGAAGGCAAGACCGTGCGCGGCGTGCCCAGCCACACCATCAGCCAGG GCAAGCTGGTGTGGGCCGACGGCGACCTGCGGGCCGAACGCGGTGCCGGGCGCTACATCGAACGCCCGGCCTACCCGGCGGTGTTCGACCTCTTGAGCAA GCGCGCCGAGCGGCACAAGCCGACGGCGGTTAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCGGGGGGGCGTTGCCCCCCCTATCGCGAGCAAGCTCGCTCCTACAGAAACCCATGCCCCCTGTAGGAGCTGGCTTGCCAGCGAAGGCGCCCGCAGAT CCCTTGTAAGAGTCAAAGGCCTATTCGCCGGCAAGCCGGCTCCTACGGATATGGGTGATCCCAGCTATAGAAAATGCCCGTCAGAGGCAACCAAGAAACG AACCGTGAGGCCAAAACCGTGATCAAGACCTTGAACCACTTGCCCCACCCGACCCTGGACAACGCCACCCTGGCCAGCCACTTCAGCGACCTGGCGCCGC CACTCAACGCCCGCCAGGCCCATCTGGAAGCTTCGCGCTGCCTGTATTGCTACGACGCGCCCTGCGTCAACGCCTGCCCCAGCGAGATCGACATTCCTTC GTTCATCCGCAATATCCACACCGACAACGTCCAGGGTGCGGCGCAGAAGATTCTCTCGGCCAACATCCTCGGCGGCAGCTGCGCCCGGGTCTGCCCCACG
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| Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATVITHDESYKADVLCAEGVIRAIGNNLDVPTGCEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQ SLLEAFQQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVQHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLLAQ GITGPEAHPLSRPSQVEGEAASRAIRIAETLGTPLYLVHVSTQEALDEISYARGKGQPVYGEVLAGHLLLDDSVYRDPDWQTAAGYVMSPPFRPRGHQEA LWRGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNTGRLSMQEFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQG SRTISAKTHHQQVDFNIFEGKTVRGVPSHTISQGKLVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAERHKPTAVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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