Pseudomonas protegens Pf-5, PFL_6269
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13298 | DNA polymerase Ligase (LigD) | IPR014144 | DNA ligase D, 3'-phosphoesterase domain | 27 | 130 | 1.3E-36 |
| NCBIfam | TIGR02777 | JCVI: DNA ligase D, 3'-phosphoesterase domain | IPR014144 | DNA ligase D, 3'-phosphoesterase domain | 15 | 149 | 7.9E-61 |
| PANTHER | PTHR39465 | DNA LIGASE D, 3'-PHOSPHOESTERASE DOMAIN | - | - | 23 | 100 | 2.4E-30 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.