Pseudomonas protegens Pf-5, PFL_1668 (cheY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 3 116 2.5E-30
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 121 3.27E-36
Gene3D G3DSA:3.40.50.2300 - - - 1 122 1.8E-38
CDD cd19923 REC_CheY_CheY3 - - 1 119 4.89875E-75
FunFam G3DSA:3.40.50.2300:FF:000019 Chemotaxis response regulator CheY - - 1 123 6.9E-69
PANTHER PTHR43228 TWO-COMPONENT RESPONSE REGULATOR - - 3 118 6.6E-29
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1 115 1.5E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.