Pseudomonas protegens Pf-5, PFL_1652 (fliQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004669
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004669
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 54 76 8.1E-16
NCBIfam TIGR01402 JCVI: flagellar biosynthesis protein FliQ IPR006305 Flagellar biosynthesis protein FliQ 1 88 2.3E-27
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 18 39 8.1E-16
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 39 54 8.1E-16
PIRSF PIRSF004669 FliQ IPR002191 Bacterial export protein family 3 1 89 1.2E-29
PANTHER PTHR34040 FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ IPR002191 Bacterial export protein family 3 1 88 2.2E-27
Pfam PF01313 Bacterial export proteins, family 3 IPR002191 Bacterial export protein family 3 6 77 3.3E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.