Pseudomonas protegens Pf-5, PFL_1636 (fleR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGACATGCTGGTGTTCGCCCGTGGCGAATTGCCCCTGACCGATCGCCTGACGCCCAAGTCGCTGTTGCAGTCGTTGCAGGCCGCGGCCCTGACCCATG TGCAGGACGTTGCCGTGCGCTGGCAGTGCGATAGCCACCACGGTGAGTTGCTGTGCAATCGCGACACGCTGGTGGGCGCCTTGCTCAATCTGATCGAGAA CGCGGTGCAGGCCAGTGCCGGCGCGGCGCGACTCAAGGTGCACCTGTACAGCCGCGGCGACACCTTGCGGCTGTGCATCAGTGACAGTGGCAGTGGTATC GACGCTGCGGTCCTGGAGCGCCTGGGAGAGCCGTTCTTCACCACCAAGGCCAATGGAACCGGGCTGGGCCTGACGGTGGTCAAGGCGGTAGCCCGTGCTC ATCAGGGAGAATTGTCGCTGCGCTCGCGTCCTGGGCGCGGTACTTGTGCGCTGGTGACACTGCCTCTGTTCTCCAGCGTGCATGGAGTGGAGTGAAGGTA
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| DNA Sequence for Gene |
>PFL_1636
|fleR
ATGGCAATCAAGGTTCTACTGGTTGAAGACGACCGCGCATTGCGCGAGGCCCTGGCGGATACCCTGCTGCTGGCCGGTCATGACTACAAGGCTGTCGGCA GTGCTGAGGAAGCATTGGAGGCTGTGGCCGCGGAGCCCTTCAGCCTGGTGGTCAGCGACGTCAACATGCCGGGCATGGACGGTCATCAATTGCTTGGCCT GCTGCGAGCCCGCCAGCCACAACTGCCGGTGTTGCTGATGACTGCCCATGGCGCCGTCGAGCGTGCCGTGGAAGCCATGCGCCAGGGGGCGGCCGATTAT CTGGTCAAGCCTTTCGAGCCGCGGGCCCTGCTGGACCTGGTGGCGCGCCATGCCTTGGGCGGCCTGGGTGTTGGCGAGGATGAGGGGCCTGTGGCCTTCG AACCAGCCAGCGCTCAGTTGCTGGAGCTGGCGGCGCGGGTGGCCCGCAGTGACTCCACGGTGCTGATTTCCGGTGAATCCGGCACTGGCAAGGAGGTGCT GGCGCGCTATATCCATCAGCATTCCCATCGAGTCAATCAGCCGTTTATCGCCATCAACTGCGCGGCCATCCCGGACAACATGCTCGAAGCCACTTTGTTC GGGCACGAAAAGGGCTCTTTCACAGGGGCCATCGCTGCCCAGCCCGGCAAGTTCGAGCAGGCCGATGGCGGCACCATCCTGCTGGACGAGATTTCCGAAA TGCCTCTGGGCTTGCAGGCCAAGCTGCTGCGGGTCTTGCAGGAGCGCGAAGTGGAGCGGGTTGGTGCGCGCAAGCCGATCACCCTGGATATCCGCGTGGT CGCCACCACCAACCGCGATCTGGCGGGGGAGGTAGCGGCCGGCCGTTTCCGTGAGGACTTGTATTACCGTTTGTCGGTATTTCCTCTGGCCTGGAAGCCG TTGCGCGAGCGTACCGCCGATATCCTGCCGCTGGCCGAGCGCCTGCTGGCCAAGCACGTCAATAAAATGAAGCACGCGGCGGCCAGGCTATCGGCCAAGG CCCAGGAGTGCCTGCTGGCCTATCCATGGCCAGGCAACGTTAGAGAACTGGACAACGCATTGCAGCGCGCATTGATCCTGCAGCAGGGGGGCTTGATCCA GCCGGAAGATTTCTGTCTTGCCGGCCCTGTGGCTTGTGCTCCGCTGCCGGCGCTGGCGCCCGTGGTGCAGATGGCAGCGCGTGGCACGGCTGCCGAGGTG GAGGTGCCGGCTCAAGAATCCGGTGGCCTGGGCGATGACCTGCGGCGCCGGGAGTTTCAGATGATCATCGATACCCTGCGCTCCGAGCGCGGGCGACGCA AGGAGGCCGCGGAACGCCTGGGTATCAGCCCGCGGACCTTGCGCTACAAGTTGGCGCAGATGCGCGATGCTGGAATGGACGTCGAGGCCTATCTGTTCGC GACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTGTGAGAGGCAAGCCCGGGATGGGCTTTTGTCGATAAGGGCCATGGAGCTGGCACCCTTGTTGCTAACACCTCACTAACCGCTGAGTGAGCGTCAAAA AATTGCGGGTCGTCAGAGAGAGTAGACCATGAGCCAAGGTGTTGAATTTAATCGGTTGATGCTGGATATGCGTGCCATGCAGATGGACGCAATGTCGCAG CCTAAATCCGCCGCGGTGGCAGAAGTCAGCGGCAGCAGCTTTGCTGACATGCTTGGCCAGGCCGTGAACAAGGTCAATGACACTCAGCAGGCGTCCAATC AGCTGTCCAGTGCCTTTGAAATTGGCAAGAGCGGTGTCGACCTGACGGACGTGATGATTTCCTCGCAAAAGGCCAGCGTGTCTTTTCAAGCCTTGACCCA GGTTCGCAACAAGCTGGTTCAAGCGTATCAAGACATCATGCAGATGCCGGTTTAAGGACGAGATTGAGTCATGGCAGAAGCAGTCGCCGATAACGTACCG
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MAIKVLLVEDDRALREALADTLLLAGHDYKAVGSAEEALEAVAAEPFSLVVSDVNMPGMDGHQLLGLLRARQPQLPVLLMTAHGAVERAVEAMRQGAADY LVKPFEPRALLDLVARHALGGLGVGEDEGPVAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQHSHRVNQPFIAINCAAIPDNMLEATLF GHEKGSFTGAIAAQPGKFEQADGGTILLDEISEMPLGLQAKLLRVLQEREVERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWKP LRERTADILPLAERLLAKHVNKMKHAAARLSAKAQECLLAYPWPGNVRELDNALQRALILQQGGLIQPEDFCLAGPVACAPLPALAPVVQMAARGTAAEV EVPAQESGGLGDDLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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