Pseudomonas protegens Pf-5, PFL_1451 (mucD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1451
Name
mucD
Replicon chromosome
Genomic location 1630533 - 1631963 (+ strand)

Cross-References

RefSeq YP_258579.1
GI 70728830
EC Number 3.4.21.-
Entrez 3475741
INSDC AAY90735.1
NCBI Locus Tag PFL_1451
UniParc UPI000054D0EB
UniProtKB Acc Q4KGQ4
UniProtKB ID DEGPL_PSEF5
UniRef100 UniRef100_Q4KGQ4
UniRef50 UniRef50_Q4KGQ4
UniRef90 UniRef90_Q4KGQ4

Product

Feature Type CDS
Coding Frame 1
Product Name
serine protease MucD
Synonyms
Evidence for Translation
Charge (pH 7) -1.02
Kyte-Doolittle Hydrophobicity Value -0.059
Molecular Weight (kDa) 50.7
Isoelectric Point (pI) 6.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000740 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1451
Search term: mucD

Human Homologs

Ensembl 110, assembly GRCh38.p14
HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
E-value: 9.0e-43
Percent Identity: 34.1

References

No references are associated with this feature.