Pseudomonas protegens Pf-5, PFL_0828 (dnaJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGCCGCCATCGACGCCAAGGTCGAAGAGCTGTCGAAAGTCTCGGCCCCGGTTGCCCAGAAGATGTACGCCGAACAGGCCCAGCCTGCAGAAGGCGCG GCACCGCACGCCGAGTCCGCTGAAAAAGCCGACGATGTCGTCGACGCCGAGTTCGAAGAAGTAAAAGACCACAAGTAATGGCTTGTTGGTCGGCCGGTTG ACTGCCTTCGGGCGGTGACTGGTAGGATGTCGCCGCGCGGGAGCTTGCTCCCGCGTTGGCGTGTCTGGAGTCAGCGAAATTTTGACGGCGTACAAGCTCC GTTTGTGCGCTGGCGGTCGGGTCGGAGAAGCTCCTGCTTTCCGGCTGTGATGACCGCAATGGTCGGCCCGCAACCGGGTTGGCTTTCCAAGACCAGGATC GTTGAATTGACGTGAGTTGGGTCCGGGCCTGTATTGGGGCTCAGCGAGTTTGGCAGAGCTCAGGAGGGTTTGCCGGACGTCCTTAAGAGTGCAAAGACTT
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| DNA Sequence for Gene |
>PFL_0828
|dnaJ
ATGGCAAAGCGTGACTATTACGAAGTGTTGGGTGTGGAGCGTGGCTCCAGCGATGCGGAGCTGAAAAAGGCTTACCGTCGCTTGGCGATGAAGCATCACC CGGACCGTAATCCCGGCGACAAAGCGTCGGAAGACATGTTCAAGGAGGCCAACGAGGCCTACGAAGTACTGTCCGATTCCAGCAAGCGTGCCGCGTATGA CCAGTACGGCCACGCTGGTGTCGACCCGAGCATGGGTGGCGGGGGGGGCGGCTTCGGCGGGCAGAACTTCTCCGATATCTTCGGTGACGTGTTCAGTGAT TTCTTCGGTGGCGGTCGCGGCGGTTCCCGTGGCGGTGCGCAACGCGGCAGCGACCTGCGTTACACCCTGGAGTTGAACCTGGAAGAGGCGGTGCGTGGCA CCACGGTGAATATCCGTGTGCCGACACTGGTCAACTGCAAGCCATGCGATGGTTCGGGCGCCAAGAAGGGGTCTTCCCCTGTCACTTGTCCGACCTGTGG CGGTATTGGTCAGGTGCGCATGCAGCAGGGTTTCTTCTCGGTGCAGCAGACCTGCCCGCGCTGCCATGGCCAGGGCAAGATCATTTCCGATCCGTGCGAT TCGTGCCACGGCGAAGGTCGGGTCGAAGAGTACAAGACGCTGTCGGTGAAAGTGCCGGCAGGTGTCGATACCGGCGACCGTATTCGCCTGTCCGGCGAAG GCGAGGCGGGGACCCAGGGTGGCCCGACTGGCGACCTGTATGTGGTGATCAATGTGCGTGAGCACGCGATCTTCCAGCGCGACGGCAAGCACCTGTTCTG TGAAGTGCCCATCAGCTTCGTAGATGCGGCGTTGGGTGGCGAGCTGGAGATTCCGACCCTGGATGGTCGGGTCAAGCTGAAGATTCCCGAAGGAACTCAG ACCGGCAAGCAGTTCCGGATTCGTGGCAAGGGCGTTGCTCCCGTGCGTGGCGGCGGTGCTGGCGACCTGATGTGCCGGGTTGCGGTGGAGACGCCAGTGA ACCTGAGTCGTCGTCAGCGCGAACTGCTGGAAGAGTTGCGTGGTTCGCTGGATGACGACAACTCTCACTCGCCGAAAACCACCGGCTGGTTCGAGGGCGT CAAGCGCTTCTTCGGTGACCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGTAACGCATGCGACGTATAGCAGTGATGGGCGCCGCGGGGCGCATGGGCAAGACCCTGGTCGAGGCAGTGCAACTGCGTTCGCCGCTCTCCGGGCTG ACCGCGGCGATCGTCCGTCCGGGCAGTTCTCTGGTGGGGGCGGATGCGGGTGAGCTGGCATCCCTGGGGCGTCTTGGCGTGCCGATGTCCGACAGCCTGG AGAAGGTGGTTGATGAGTTCGATGTGCTGATCGATTTTACCTTGCCGGAAGTGATGCTCAAGAACCTGGCGTTCTGCCGCAAGGCAGGCAAGGCCATGGT GATCGGTACCACCGGCCTGGGTGCCAGGGAAAAGCAATTGCTGGCCGAGGCGGGCAAGGAGATTCCGATCGTCTTCGCTGCCAACTTCAGTGTTGGGGTC AACCTGTCGCTGAAGCTGCTGGATATGGCGGCTCGGGTGCTGGGTGATGATGCGGATATCGAGATCATCGAGGCGCATCACCGACACAAGATCGATGCGC
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| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGSSDAELKKAYRRLAMKHHPDRNPGDKASEDMFKEANEAYEVLSDSSKRAAYDQYGHAGVDPSMGGGGGGFGGQNFSDIFGDVFSD FFGGGRGGSRGGAQRGSDLRYTLELNLEEAVRGTTVNIRVPTLVNCKPCDGSGAKKGSSPVTCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIISDPCD SCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHAIFQRDGKHLFCEVPISFVDAALGGELEIPTLDGRVKLKIPEGTQ TGKQFRIRGKGVAPVRGGGAGDLMCRVAVETPVNLSRRQRELLEELRGSLDDDNSHSPKTTGWFEGVKRFFGDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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