Pseudomonas protegens Pf-5, PFL_0752 (kynB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004328 formamidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01969
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019441 tryptophan catabolic process to kynurenine
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31118
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004061 arylformamidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31118
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00380 Tryptophan metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF102198 Putative cyclase IPR037175 Kynurenine formamidase superfamily 5 209 6.15E-57
MobiDBLite mobidb-lite consensus disorder prediction - - 9 23 -
Gene3D G3DSA:3.50.30.50 Putative cyclase IPR037175 Kynurenine formamidase superfamily 3 214 7.0E-60
FunFam G3DSA:3.50.30.50:FF:000001 Kynurenine formamidase - - 4 211 7.2E-87
PANTHER PTHR31118 CYCLASE-LIKE PROTEIN 2 IPR007325 Kynurenine formamidase/cyclase-like 5 208 1.1E-22
Pfam PF04199 Putative cyclase IPR007325 Kynurenine formamidase/cyclase-like 9 154 2.3E-15
NCBIfam TIGR03035 JCVI: arylformamidase IPR017484 Kynurenine formamidase, bacteria 6 211 2.4E-103
MobiDBLite mobidb-lite consensus disorder prediction - - 1 25 -
Hamap MF_01969 Kynurenine formamidase [kynB]. IPR017484 Kynurenine formamidase, bacteria 6 211 45.171204

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.