Pseudomonas protegens Pf-5, PFL_0408 (proY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0408
Name
proY
Replicon chromosome
Genomic location 470534 - 471946 (+ strand)

Cross-References

RefSeq YP_257552.2
GI 346642680
Entrez 3480999
INSDC AAY95817.2
NCBI Locus Tag PFL_0408
UniParc UPI000219FF2F
UniProtKB Acc Q4KJN1
UniProtKB ID Q4KJN1_PSEF5
UniRef100 UniRef100_Q4KJN1
UniRef50 UniRef50_B2GIW1
UniRef90 UniRef90_Q4KJN1

Product

Feature Type CDS
Coding Frame 1
Product Name
permease
Synonyms
Evidence for Translation
Charge (pH 7) 5.60
Kyte-Doolittle Hydrophobicity Value 0.926
Molecular Weight (kDa) 50381.7
Isoelectric Point (pI) 9.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 420 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0408
Search term: proY
Search term: permease

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]
E-value: 2.3e-14
Percent Identity: 26.6

References

No references are associated with this feature.