Pseudomonas protegens Pf-5, PFL_0325 (gpuA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0325
Name
gpuA
Replicon chromosome
Genomic location 374611 - 375567 (- strand)

Cross-References

RefSeq YP_257470.1
GI 70733830
EC Number 3.5.3.17
Entrez 3480917
INSDC AAY95735.1
NCBI Locus Tag PFL_0325
UniParc UPI000054CC9B
UniProtKB Acc Q4KJW3
UniProtKB ID Q4KJW3_PSEF5
UniRef100 UniRef100_Q4KJW3
UniRef50 UniRef50_Q9I6K2
UniRef90 UniRef90_Q4KJW3

Product

Feature Type CDS
Coding Frame 1
Product Name
3-guanidinopropionase GpuA
Synonyms
Evidence for Translation
Charge (pH 7) -7.65
Kyte-Doolittle Hydrophobicity Value 0.031
Molecular Weight (kDa) 34217.7
Isoelectric Point (pI) 5.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 438 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000285 (312 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0325
Search term: gpuA

Human Homologs

Ensembl 110, assembly GRCh38.p14
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value: 1.6e-80
Percent Identity: 48.1

References

No references are associated with this feature.