Pseudomonas protegens Pf-5, PFL_0188

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AGTTCCACCGCGCCAAGCGCCTGCTGTCCCGGGAAACCAGCCTGCTGGAAGACCGCCACCACCTGCGCATCCAGAGCATGCTGGAGCACAGCCAGGCCTT GAAGGTGATCTACGAGAAGCGTCTGGCCCTGCAGCAGATCTGGGTCAAGACCAGCTCCAACGGCCACGACATGCTCGCGGCCATCAAGGATTGGGTACAC GAGGCCGAGGCCAGCGGCATTCAGTCCCTGCGTGATTTCGCCCATCAGCTCAAGACCTATTCCCTGCGCCCCACCACCGCCTGACCCCAGCCCCTCGCCA CTCCCGTGGCGAGGGGCTGCCCTTCTGAAATCAAGCCTTGCAGGCCCCTCTCGACCGTCTGGCGGGCGCTGGCGCTATCGCTGTAGCGGCCGGGAACTTA GCGCCCGATCCCCTATCTCAAACAACACTTCGCCACCCAGGCGGGCTTGGTTGTAGCCGCTGCCTAACGGCGCGCGGCACGCCCTTTGAGATCTGTGCCG
DNA Sequence for Gene
>PFL_0188
ATGGTCAACAAGAACCCACACACTCCCTCTGCGCTTCCACAGTGGCCCGAAGCCGCGCAAACCCTGATGGCCCTGATGCATGCACAGGGCGAAGTGGCCC GCCTGACCGAACGCGAGCAGCTGTTCAGCTCGCTGCTGGTCAGTGTCAACGCGGTACTCTGGGCCTTCGACTGGGACAGCCGCCAGGTGCTGTACGTCAG CCCGGCCTATGAACGGATCTTCGGTCGCCCCGCAGGCCTGCTCCTGGCGGACTGCAATCAATGGCGCGACAGCATCTACCCCGATGACCTGGAGTACGCC GAGCGCAGCCTGGCCCAGGTCCTGGAAAAGGGCGCGGTGGAAGATCGCGAGTACCGCATCATCGATGCCCAGGGCCAGGTGCGCTGGCTCAGCGACAAAT GCTTCATCAACCGCAATGCCGAGCCCGGGCAACGCCTGATCGTGGTCGGCATCGCCGAAGACATCACCGAAAAGAAGCAGCTGGAAACCGAGTTGCAACG CCTGGCCACCACCGACGTGCTGACCCAGAGCAGCAACCGTCGGCACTTCTTCGAATGCGCCAACCGCGAGTTCGAGCAGGCGCGCCTGCAAGGTTCGTCC CTGGCCTTCTTGCTGCTGGATATCGATGACTTCAAAGTGATCAACGACACCTACGGCCACCCCGAAGGCGACATCGTCCTGCAGCGCATCGCCGAAAGCG GGCGCGCGGCCCTGCGTCGCGGCGACCTGTTCGGGCGGATCGGTGGCGAGGAGTTCGCCGCGGTTTTTCCCGGCTGCACTGCGGACATGGCGCGCCAGGT GGCCGAGCGCCTGCAACGGGAGATCCAGCGCCAGAATTTCAGCCACCAGGGCCAGACGTTCACCATCACCGTGAGCCAGGGCCTGACCGGCCTGCTGGCG GAAGACGAAAGCCTGGACAACCTGTTCGCCCGCGCCGACAGCGCCATGTACGAAGCCAAGCGCCAGGGCAAGAACCGCATCATCACCGGATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCGCGATCACTCGCCCGTAGGAGCTGGCTGGCCCGCAAGGCTTGCACAAGACTCGAAGGCCTCTTCGCCGGCCAGCCGGCTCCTACAGTGGTTCAGCC CTTGCGCAGGCGAGTCAGTTCCGGCAGCCCGACCTTCAGCAGCCGCGCGGTCTTGCAGCGCGCGATCTCTTCCACCCCTTCGTGCTCGGTCAGCCGCGCC AGCTGCGCCGCCAGGTTCATCACCAGTGCCTCGCGGGAATACACCCCACCGCCCAACTGATAGATCGAGGCAATCAGTTCCCGCAGTTCCAGGGGCATGC GCCAGCGGGTCCGCAGCGCCGAGCCGTAGGCCGCGCCAAAGCGCTCCAGGGCATCGCCGATTTCTTCCTGGTCGTCCAGCTCGCCGCCGGCCTGTTTCCA CTCCTGCAAGCAACGCAGCAACGCCAGATCGCCCAGGCGATGCAGTAGCCCGGCGCAGTAGCAGCGCTCCTGGTCCAAGTCCAGCAGGCGCGCCAGGGTC
Amino Acid Sequence
>diguanylate cyclase domain-containing protein
MVNKNPHTPSALPQWPEAAQTLMALMHAQGEVARLTEREQLFSSLLVSVNAVLWAFDWDSRQVLYVSPAYERIFGRPAGLLLADCNQWRDSIYPDDLEYA ERSLAQVLEKGAVEDREYRIIDAQGQVRWLSDKCFINRNAEPGQRLIVVGIAEDITEKKQLETELQRLATTDVLTQSSNRRHFFECANREFEQARLQGSS LAFLLLDIDDFKVINDTYGHPEGDIVLQRIAESGRAALRRGDLFGRIGGEEFAAVFPGCTADMARQVAERLQREIQRQNFSHQGQTFTITVSQGLTGLLA EDESLDNLFARADSAMYEAKRQGKNRIITG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site