Pseudomonas aeruginosa AZPAE15017, NT33_RS08750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCAGCCGCCGGAGGAAACGATTCTAGCGCCGGCCGATCAAGGCGCTCCAGCTTCCTCGCGCCGACAATGGGCGATTGTCGGACGGGCCTTGCCAGGC TCCTCGTGCCACCGCCGACAGCAATTGGCACTCCTGTGCCACCGGGCCGCGCCCTCCGCGGCACAAACCGCCCGCGGCTCTGGCAAGCACTTCTCCGACA TCCTCTTCCCACCTCTCCGTCATCTCTTTCCCGAAGCCCCTACAACTCTTGAAGAAAAGGGGGCATCCAGAATCAGAAAGCTACGATTGTTTCCGATTCC CCTCCTATCCAGCCTATTGGGCACCCCGTTTTCCAGTCCTGATCCATATCGGCACCGTCGATGTGGTTCCCGGGTTTTCTTCCGCAAAACAAGCGAACCG ATGAACGATGCCGCCCTGTCTCGATGACTTTCCGTTGAACCATCACCCTCTGCCATCCAGCGACTCCCTGAACAATGCCCGACCAAGACGCAGTGCCGGT
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| DNA Sequence for Gene |
>NT33_RS08750
ATCGCCGGCGTGGCGCTGCTGCTCTCCTCCCTGGGCATCGCCGCGGCCCCCATCTCGATACCGGACGCCGGCCAGGCCGTACGCGATGCGCAGAGCCAGC GCCTCGACCTGCCCGCGCCCATGGAGCTGGATCCGGAAAAACCCGCGCCGCAAGACGCAGGTGCTACCGACGCCTCTGCCGAGGGGCCACGAGTACGGGT CGACAAGTTCCAGGTAGGCGGCAACCGGGTGTTCGATTCCGCGCGGCTGCTCGCCCTGCTGGCCGATCTCGAGGGGCATGAGCTGAGCCTGCCGCAACTG CATGCCGCCGCCGGCCGAATCGGTGATTTCTACCAGCAGCATGGCTACGTACTGGCGCGTGCCTACCTGCCCGCACAGGAAATCGAGAACGGCACGGTAC GGCTCGAAGTCGTCGAGGGGCGCTATGGGCAGGTCGAACTGCACAATGGCTCGCGTACCCTCGATCCGGTGGTGCGCCAGCCCCTGGCCAATCTGGAAAG CGGCACCCCCGTAAAGGGCGACGAACTCGAGCGCAGCCTGCTGCTGCTCAGCGACATTCCGGGCGTGGAAGCCAAGGGCACGTTGCTGCCGGGACAAGTT CCCGGCACCACCGACCTGCGCATCGATGCCCGGACCGCCCCGCTCTTCAGCGGCCGCCTGGAGGCGGACAACTTCGGCGACCGCGCCATGGGCGAATACC GCCTGGGCGGCGTCTTCGACCTCAACGGTCCGCTGGGCCTGGGCGACCAGCTGAACCTGCGCCTGCTCGGCAGCGATCGCCATCAACGCTACTACCGCGC CGCCTACCAGCTGCCGCTGGGTCCCTGGGGATCACGCATCGGCATGGCGCACTCGGAAACCTCCTACCGGCTGGTGCGCGACTTCAAGGAATGGGAAGCC CACGGGCGAGCCATCATCGACAGCCTGTTCCTCACCCATCCGCTGCTACGCAGCCGCGCCTTCAACCTGTCCACGCAATTACAGTACGAAGAAAAGCGAC TGAACGACGACATCGACCTGTTCGAGTTCAAGAAGAGCAAGCAGATCCATCTCTGGACCGCCGGTTTCAGCGGCAGCAGCCAGGACCGCCTGCTCGGTGG CGGGCAGACCGGTTTCTCGCTGGCCTACGGGCATGGCCGGCTGAACCTGGACAGCGGCGAGCGCAGCAGGGACAGGAAGAGCGCCGGCACACAGGGGCGC TTCGACAAACTCTCCATCAACGCGGTACGCCTGCAGCGGCTGACCGACCGCCTGCAGCTGTTCACTCAGCTCAATGCCCAGTGGAGCTCCGGCAACCTCG ACAGCGCGGAGAAGTTCGACATCGGCGGTGCCTATGGCGTCCGTGCGTTTCCGTCAGGCACCCAGGGCGGCACCGGCGACGAGGGTTGGCAGGCGAGCGC GGAGTTGCGCTACAGCCTGGCTCCCGGCTGGCAACTGAGCAGCTTCGTCGACCAGGGCGCGGTGAAGTTCCAGAAGAAGCCCTGGACCCCGGAAGTCAAT CGCAACCGCATGGGCGGGGCCGGCACCGGCGCCACATGGTACGGCGCGGACCATCAGGTCAGCCTGACCGCCGCCTGGCCGCTGGGCCAGGAGAAGGGCA TCGCGCCCGACCGCAATCCGCGCCTGTGGCTGCAGGCGACCCGTTATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGACACCCGTTCTGCTGCGGAGCAGCAGAACTTTTCCCACCCAGAGAGGACCTACCCATGAATAGAAGCTACGCCCTGGTCTGGAACCAGGCTACAGGA TGCTGGAATGTCGCCAGCGAAGGCACCCGCCGCCGCGGCAAGAGCGGCCGCGGCACGCTGCTGGCAGTCGCCGGCGCATCGTTGCTGAACCTTCTCGGCC TGCCCGAAGCCTTCGCCCTGCCCTCCGACGGCAAGATCGTCAATGGCCAAGGCAGCATCCATACCAGCGTCGACGGCAAGCACATGACCATCGACCAGCA GAGCCAGAAGCTGATCGCCCACTGGAACGGCTTCGACATCGCCGCCGACGAGCGCGTCAGCTTCCAGCAACAGAACAGCAATGCCATCGCCCTCAACCGG GTACTCGGCAACGATGGCAGCAAGATCCTGGGCAAGCTCGACGCCAACGGCAAGGTGTTCCTGATCAACCCCAACGGGGTGATGTTCGGCAAGACCGCCC
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| Amino Acid Sequence |
>membrane protein
MAGVALLLSSLGIAAAPISIPDAGQAVRDAQSQRLDLPAPMELDPEKPAPQDAGATDASAEGPRVRVDKFQVGGNRVFDSARLLALLADLEGHELSLPQL HAAAGRIGDFYQQHGYVLARAYLPAQEIENGTVRLEVVEGRYGQVELHNGSRTLDPVVRQPLANLESGTPVKGDELERSLLLLSDIPGVEAKGTLLPGQV PGTTDLRIDARTAPLFSGRLEADNFGDRAMGEYRLGGVFDLNGPLGLGDQLNLRLLGSDRHQRYYRAAYQLPLGPWGSRIGMAHSETSYRLVRDFKEWEA HGRAIIDSLFLTHPLLRSRAFNLSTQLQYEEKRLNDDIDLFEFKKSKQIHLWTAGFSGSSQDRLLGGGQTGFSLAYGHGRLNLDSGERSRDRKSAGTQGR FDKLSINAVRLQRLTDRLQLFTQLNAQWSSGNLDSAEKFDIGGAYGVRAFPSGTQGGTGDEGWQASAELRYSLAPGWQLSSFVDQGAVKFQKKPWTPEVN RNRMGGAGTGATWYGADHQVSLTAAWPLGQEKGIAPDRNPRLWLQATRYF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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