Strain | Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTTCCCCCGGAGGAAAGACGAACCATGGCAGACGAAGAAAAAGTGACCACCGAGGAACAGGCACTGGCCGACGAGTGGGCGGCGGCGCTGGCCGAGGCG GGCGACGCCAGCCAGGACGACATCGATGCGCTGATGGCCCAGGGCGGCGCGACCCCCGTGGCGGAGCCGAGCACCCCGCGGGCGCCGATGGAAGAGTTCG GCGCTTCGCCGAAGGCGCCGACCATTTCCGGCCTGGAGGGGCCCAACCTGGATGTGATCCTGGACATCCCGGTGACCATTTCCATGGAGGTCGGGCATAC CGACATCAGCATCCGCAACCTGCTGCAGCTCAACCAGGGGTCGGTGATCGAACTCGATCGCCTGGCCGGCGAGCCGCTGGACGTACTGGTCAACGGCACC CTGATCGCCCACGGCGAGGTGGTGGTGGTGAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGTCCCAGCGAACGCATCAAGAAGCTGCGCTGAC
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DNA Sequence for Gene |
>NT33_RS07100
ATGCGTCGCTACCTGTTCGCCGGCTTCCTGCCGGCACTCGCCTCGCTGAGCGCGCCGCTGTGCGCCGCGGAGGGGACGACGGGTGCCGCCGCGCCGACGG TGGGCGCCGCTTCCGGCGCCGCCGCGCAACTGGCCCAACTGGTGCTCGGCCTGGGCCTGGTGATCGGCCTGATCTTCCTGCTCGCCTGGCTGGTGCGCCG GGTGCAACAGGCCGGTCCGCGCGGCAACCGCTTGATCCGCACCCTCGCCAGCCAGCCGCTGGGTCCGCGCGACCGGCTGGTGCTGGTGCAGGTCGGCGAG GAGCAGATCCTGCTCGGCTTGACGCCCGGCCGGATCACGCCGTTGCACGTGCTCAAGGAGCCGGTACACCTGCCGGACGGCGAGCCGGCCACGCCGGAAT TCGCCCAGCGCCTGCTGGAGCTGCTGAACAAGGACCCCAAGGGCAAGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTCCGCGCATTTCCCTGGCCGGCGCGCTCGCCGCGCTCTGCCTCCTGCTGCTGGCGCCGTGGCCGGCGCTGGCCGCCGACCCGACATCGATCTCGGCGAT CACCGTGACCACCAACGGCCAGGGCCAGCAGGAGTATTCGGTCAGCCTGCAGATCCTGCTGATCATGACCGCGCTGAGCTTCATTCCGGCGTTCGTCATG TTGATGACCAGCTTCACCCGGATCATCATCGTCTTCTCCATCCTGCGCCAGGCGCTGGGCCTGCAATCGACGCCGTCGAACCAGGTGCTGGTGGGGTTGG CGCTGTTCCTGACCATGTTCGTCATGGCCCCGGTGTTCGACAAGATCAACAGCCAGGCCCTGCAGCCCTACCTGAACGAGCAGATTCCCGCCCAGGAAGC CCTGCAAAAGGCCGAGGTGCCGCTGAAGGCGTTCATGCTGGCGCAGACTCGCACCTCCGACCTGGAGCTGTTCGTGCGCCTGTCCAAGCGCACCGACATC
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Amino Acid Sequence |
>flagellar assembly protein FliO
MRRYLFAGFLPALASLSAPLCAAEGTTGAAAPTVGAASGAAAQLAQLVLGLGLVIGLIFLLAWLVRRVQQAGPRGNRLIRTLASQPLGPRDRLVLVQVGE EQILLGLTPGRITPLHVLKEPVHLPDGEPATPEFAQRLLELLNKDPKGKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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