Strain | Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_40, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGCGCTTCATGGTGGTGGCGCCGAGTTCGACCATCGACATGAACCTGGAGAGCGGCGAGGACATCCCGATCGAAGAGCGCGACGGTCGCGAGCTGCTGG AAATCGGCGGGCGACGGGTGGCGGCCGAGGTCGATGCCTACAATCCGGTATTCGACGTGACCCCGGCGGATCTTATCGATGCCATCGTGACCGAGCGTGG CGTCGTCGAGCGTCCCGACGCCGAGCGCATGGCCGCCCTGATGAGCCGCAAGCGCCTGCATTGAACGAGGCGACTGGAGGTCGTCCCCGCCAGGGCCTTT GCCTTGGGCTGGGGCGTGGGCTGTGGTAAGCTCCGACGGTTATTCGAGCGCCCCGCGGAGGGGCCTCGAGAGTGCGCGAATCCTTGACTCAAGTCGTTGA TTTGTAGTGAGTTGGCGCTGCTCGGGCATGCGCCGACCTACTTCGTTTGCCTCAGGATCGAGGCGGCGAAGTTCCACCAGAAAAAGGAACCAGGCTTCTC
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DNA Sequence for Gene |
>NT33_RS29600
ATGGGCGAACTGGCCAAAGAAATTCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTATCTCGACTACGCGATGAGCGTGATCGTCGGGCGGGCCC TGCCGGATGCACGTGACGGCCTGAAGCCGGTGCACCGCCGTGTGCTTTATGCCATGAGCGAGCTGGGCAACGACTGGAACAAGCCCTACAAGAAATCCGC CCGTGTGGTCGGCGACGTGATCGGTAAGTACCACCCACACGGCGACACCGCGGTCTACGACACCATCGTGCGCATGGCGCAGCCGTTCTCGCTGCGCTAC ATGCTGGTAGACGGCCAGGGCAACTTCGGTTCGGTGGACGGCGACAACGCCGCAGCCATGCGATACACCGAAGTGCGCATGGCCAAGCTGGCCCATGAAC TGCTGGCGGACCTGGAAAAGGAAACCGTCGACTGGGTGCCCAACTACGATGGCACCGAGCAGATCCCGGCGGTCATGCCGACCAAGATTCCCAACCTGCT GGTCAACGGTTCCAGCGGTATCGCCGTGGGCATGGCGACCAACATCCCGCCGCACAACCTCGGCGAAGTGATCGATGGCTGCCTGGCGCTGATGGACAAC CCCGACCTGACCGTCGATGAGCTGATGCAGTACATCCCCGGTCCGGACTTCCCCACCGCCGGTATCATCAACGGCCGCGCCGGGATCATAGAGGCCTACC GCACCGGGCGCGGGCGCATCTACATCCGCGCCCGCGCCGTCGTCGAGGAGATGGAGAAAGGCGGCGGCCGCGAGCAGATCATCATCACCGAGCTGCCGTA CCAGTTGAACAAGGCGCGGTTGATCGAAAAGATCGCCGAGCTGGTGAAAGAGAAGAAGATCGAGGGTATTTCCGAGCTGCGCGACGAGTCCGACAAGGAC GGCATGCGCGTGGTCATCGAGCTGCGTCGCGGCGAGGTGGGCGAGGTGGTCCTCAACAATCTCTATGCCCAGACCCAGCTGCAGAGCGTGTTCGGCATCA ACGTGGTGGCCCTGGTCGACGGGCAGCCGCGCACGCTGAACCTGAAGGACATGCTCGAAGTGTTCGTCCGCCACCGCCGCGAAGTGGTGACCCGGCGTAC CGTCTACGAGCTGCGCAAGGCCCGCGAGCGCGGGCACATCCTGGAAGGCCAGGCGGTCGCCCTGTCGAACATCGACCCGGTGATCGAGCTGATCAAGAGT TCGCCGACCCCGGCCGAGGCCAAGGAACGCCTGATCGCCACTGCCTGGGAGTCCAGCGCGGTGGAAGCGATGGTCGAGCGTGCCGGCGCCGACGCCTGTC GTCCGGAAGACCTGGATCCGCAGTACGGCCTGCGCGACGGCAAGTACTACCTGTCGCCGGAACAGGCCCAGGCGATCCTCGAGCTGCGCCTGCATCGCCT GACCGGCCTGGAGCATGAGAAGCTGCTCTCCGAATACCAGGAAATCCTCAACCTGATCGGCGAGCTGATCCGCATCCTGACCAATCCGGCGCGCCTGATG GAGGTGATCCGTGAGGAGCTGGAAGCGGTCAAGGCCGAATTCGGCGATGCTCGCCGCACCGAGATCGTGGCTTCCCAGGTCGACCTGACCATCGCCGACC TGATCACCGAGGAAGACCGCGTGGTGACCATCTCCCACGGCGGCTACGCCAAGTCCCAGCCGCTGGCCGCCTACCAGGCGCAGCGTCGCGGTGGCAAGGG CAAGTCCGCCACCGGGATGAAGGACGAGGACTACATCGAACACCTGCTGGTGGCCAACAGCCATGCGACCCTCCTGCTGTTCTCCAGCAAGGGCAAGGTC TACTGGCTGCGTACCTTCGAGATCCCGGAAGCCTCGCGTACCGCGCGTGGCCGGCCGCTGGTGAACCTGCTGCCGCTGGACGAGGGCGAGCGGATCACCG CGATGTTGCAGATCGACCTGGAGGCGCTGCAGCAGAACGGCGGCGCCGATGACGACCTCGACGAAGCCGAAGGCGCGGTGCTCGAGGGCGAGGTGGTCGA GGCCGCCGAGGTCGAGGAAGTCGAGGGCGAGACCGCCGAGCTGGTGGCCGAGCCGACCGGCGCCTACATCTTCATGGCCACCGCCTTCGGTACCGTGAAG AAGACCCCGCTGGTGCAGTTCAGCCGTCCGCGCAGCAGCGGCCTGATCGCGCTCAAGCTGGAAGAGGGCGACACCCTGATCGCCGCCGCGATCACCGATG GCGCCAAGGAAGTCATGCTGTTCTCCAGCGCCGGCAAGGTGATCCGCTTCGCCGAGAGCGTGGTGCGCATCATGGGCCGCAACGCCCGTGGCGTACGTGG CATGCGCCTGGGCAAGGGACAGCAGCTGATCTCCATGCTGATTCCGGAGTCCGGGGCGCAGATCCTCACCGCCTCCGAGCGCGGCTTCGGCAAGCGTACC CCGCTGAGCAAGTTCCCGCGTCGCGGCCGTGGCGGCCAGGGGGTGATCGCCATGGTCACCAACGAGCGCAACGGCGCGCTGATCGCCGCGGTACAGGTCC AGGAAGGCGAGGAGATCATGCTGATTTCCGACCAGGGCACCCTGGTGCGGACGCGTGTCGACGAAGTCTCCCTGTCCGGCCGCAATACCCAGGGCGTAAC CCTGATCAAGCTCGCCAGCGACGAGGTACTGGTCGGTCTGGAGCGTGTCCAGGAGCCGTCGGGCGGGGATGACGAGGACCTGCCCGAGGGCGAGGAAGCT GCCGAATCGCTGGGCGAGTCGGCCGAATCCGAACCCGCGGCGGAAGCGGAAGGCAACGAAGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCTCGGGGCGGGCGCTTGCGCCCGCCCGGCCGATGACGTCGGCGGATAACTCACGGCTATCCGCCCTACCTATAGCGAGAGTGGATGTGAGCAAGCGAG CCTTCAATTTCTGCGCCGGTCCCGCGGCGCTTCCCGACGCAGTTCTGCAACGTGCCCAGGCCGAGCTTCTCGACTGGCGGGGCAAGGGCCTTTCGGTCAT GGAAATGAGCCACCGTAGCGACGACTACGTGGCCATCGCCAGCAAGGCCGAGCAGGACCTGCGCGACCTGCTCGACATTCCCTCTGACTACAAGGTGCTG TTCCTGCAGGGCGGCGCCAGCCAGCAGTTCGCCGAGATCCCGCTGAACCTGCTGCCCGAAGATGGCGTCGCCGACTATATCGATACCGGTATCTGGTCGA AGAAGGCCATCGAGGAGGCCCGTCGCTATGGCAGCGTGAACGTCGCGGCCAGCGCCAAGGAGTACGACTACTTCGCCATTCCGGGTCAGAACGAGTGGAC
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Amino Acid Sequence |
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY MLVDGQGNFGSVDGDNAAAMRYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALMDN PDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRIYIRARAVVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKD GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRREVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKS SPTPAEAKERLIATAWESSAVEAMVERAGADACRPEDLDPQYGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLSEYQEILNLIGELIRILTNPARLM EVIREELEAVKAEFGDARRTEIVASQVDLTIADLITEEDRVVTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFSSKGKV YWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDEAEGAVLEGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVK KTPLVQFSRPRSSGLIALKLEEGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKGQQLISMLIPESGAQILTASERGFGKRT PLSKFPRRGRGGQGVIAMVTNERNGALIAAVQVQEGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASDEVLVGLERVQEPSGGDDEDLPEGEEA AESLGESAESEPAAEAEGNEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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