Pseudomonas aeruginosa AZPAE15017, NT33_RS27915

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCTTCAGCGGTGCCGGGCCGGAACTCTTCGAGCTGTCCCTGGTGGACTTCGCCGGCAACGGCGCGCGCCTGGCGCACAACCGCAAGCTGCTGGAAACG GTGCTCGGATCGATGGACGCCCTCAGCAGCCGGGTGAGTTGGACCGACACCCTGAAGAGCAAGATCCTGCTCGGCGTCTGGGGCGAGTTTCCCGCCCTCG ACCGCCACTACGTGGCCGCCTGTCGCGCGCTGTATCCGCGCCGTGGCCTGACGAGCGTCAACGGCGGCACCCTCACCGCGCTGCACCGCCTGATCGACGA AGAAAGGCTGTCGTTCCCGCGCCTGGAGACCGCCCGCAAGGGGCTCCTCTATCCCACCGGGCGCCTGGCCGACATGGCGTTCTTCCAGTACGGCCTGGAG AACGCCTGAGGCGCTGCGCCGCCGATCCGGGGGACTTGTGGGCATGCCCTCGCTGTAAGTAGTATGAGACTCATTCTCAATTACAACAGCGATCCCCTCC
DNA Sequence for Gene
>NT33_RS27915
ATGCCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTATCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCG CGGAAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTATCTGACCACCGT CGCCAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCG GAACAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGACAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCG AAGGCCTGAAGTACGAAGCCATCGCCGAACGCCTGGGCGTGTCCCTGGGTTCGGTCAAGCGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGAT GGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGCCGCGGGCGAAGGTCGGATTCCCTCGCCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGCGCCA GGCCTGCGCCCAGTGGCGGCAGCGCAGCCCGCAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGCACTG GCCCTGCCGACCCTCGGCCGCGAGCGCGGGCTGGACCGGCGGCGCGCGATAAAGCACCTCGCCCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCCACCT GGCAGGCCGAACCATTGCGCGACTGGCTGGCCGACCAGCGCACCGGCGTCGGCGAACAGCGCCGCCTGACCCTGGCCGACGGCAGCCTGCTGACCCTGAA CACCGACAGCGCCGTGGACCTGGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCGTCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MPPADASLHDAVSHLYQDHHGWLQGWLRRRLGCAENAADLAQDTFARLLASRRVLDAREPRAYLTTVAKGLMINWFQRQSLERAYLDALANLPEDLAPPP EQRLMVLETLHEVDALLDSLPDRVRQAFLLAQIEGLKYEAIAERLGVSLGSVKRYMQQAFRQCLELME
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site