Pseudomonas aeruginosa AZPAE15017, NT33_RS25860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGGCCTCGCGCCAGTGCGCGCGCAGCAGGCGATGGGCGAGGCCGTGGAAGGTGCCGACCCACATGCCCGCCGGATTGATCCCGAGCAACTGCTCGATG CGGTGGCGCATCTCCGCCGCCGCCTTGTTGGTGAAGGTCACCGACAGGATGCTGTAGGGCGAGGCGTGCTCGACCTGGATCAGCCAGGCGATCCGGTGCA CCAGTACGCGCGTCTTGCCCGAGCCGGCACCGGCGAGGACCAGTTGGCGGCCCAGCGGCGCGGCCACGGCCTGGCGCTGCGGGTCGTTGAGGGAGTTCAG CAGGAGGGAGAGGTCGTCGTTCATCGCGGCATTCTACCGGGGCGGGGAAAAGCCGGGCAAACCGGGCCGCCATTCGGCGCAGGCCGGCGCAGCGTCGGGC CTGGCGGCGGAAAAATGCTCTATCCCGGCCTTGGGCAGCCTGCCCCTGCTCGGTTATGCTCCGGCCACTTCAAGGCAAACCACTACAAGAACAAGCGCCT
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| DNA Sequence for Gene |
>NT33_RS25860
ATGACCGTCCATGTCGAGCCCTTGGCGCTGCCGGGCGGCAGCACCGATGTACTGCGGCTCTACGCCCGCGAAATCGCCATCGAGCGTACCCGGCTCCTTT ATCTCGGCTCGCGCACGCCGACCCTGCTCATGCTGCTCGGCGGCGTGATCAGCGCCTGCCTGGTGTGGGGCAAGGTCAGCAGCTGGCTGCTCGGCGGCTG GCTGGTCTGGCTGGTGTTGCTCGCCGTCCTGCGTCTGTTGCAGGTCGCCGCCTTCCAGCAGGCCGACAGCCGGCGCCAGGCCAGCCGCCACTGGCGGCGG ACCTTCCTGTGCGGCGCCGGCGCCTCGGGCCTGACCCTGGCGTTCGCGGTGATCATGCTGGTCCCGGCCGATGCCTTCCTCCAGCAGGTGCTGGTGTTCG GCCTGGTGGCGGCGGCGATCCTCTCCGCCAGCGTCGCCTATGCGGTGAGCCTGCCGGCCTTCCTCACCTTCGCCTTGCCGGGCCTGCTGCCATCCATCGT TTTCCTGCTGTTGCAGCCGCATAGCCTGTTGCAGGGCTGGGGCGTGCTCGGCCTGATCCTGCTGGTGGCGCTGCTGGTGGTCGCCGGGCAGATCCACCGG CTGGTGCAGGGCGCGCTGCTGCGACGCTTCCAGACCCAGGCGCTGAACCTGCACCTGGAACGCGTCAACGCCGAGGCCGAAGCGCTCAATCGCAAGCTCG CCCAGGAGGTCGGCCAGCGACGCCTGGCCGAACGCGAGCTTCGTGCCGCCCGCGATGCCTTGCAGCGCCGGGTGGAGGCGCGCACCGAGGAGCTTGGCGC GACCAGCCAGGCGCTCAGCCAGAGCGAGGCGCGCCTGGCCATGGCCCTGGAGGCCAGCGAACTGGGGTTGTGGGACTGGGACTTGGAGAGCGGCCGGGTC CAGCATTCCTATCTCGAGGCGGTCTTCAGCGACGCCGGGGACGGTCCCGAGGACTATCGCAGGCTGATCGAAAGCATCCACCCCGGCGACCTGCCGCGCA TCCGTCGCGCCCTCGCCGAACATCTCAAGGGGCGCAGCGAGCTATACCGGGTGGAGTACCGCGTGCGCGACCGGGAGGGCGGCTGGCGCTGGCTGGAGGA TCGTGGCCGGGCCATGGCTCGCGACCCGCGGGGACGGGTGACGCGGATGCTCGGCACGCGCAGCGACATCAGCGCGCGCAAGCGCCTGGAAGAGCAGCAG CAACTGGCCGCGACAGTGTTCGAGGCGGCCAGCGAGAGCATCGTGATCCTCGATCCGGCCTACAACCTGCTGGCGGTCAACCAGGCCTTCAGTCGCATCA CCGGCTATCGCCGCGAGGACGTGGTCGGGCGCAACGCCAGCCTGCTGGTGAATACCCCCGAGGCCCAGCGCCACTACCGGCAGATCCGCGCCGAGCTGCG CCAGCACGGGCAGTGGCAGGGCGAACTGGTGGATACGCGGAAGAATGGCGATCCCTATCCCCAATGGCTGCAGCTCAACCTGCTGCGCGACGGCAATGGC GAGGCGACCCACATCGTCGGTTTCTTCACCGATCTCAGTGCCCGCCGCGACGTCGAGGAGCGCCTGCGTCACTTGCTGCACTACGACGAACTGACTGGCC TGGCCAACCGCCGGTTGTTCCGCGAGCGGCTGCACGAGGCGGCCCAGAGGGCGCGCCAGGAGGAGAGCGGGCTGGCCCTGCTGCTGATCGACCTGGACCG CTTCAAGCTGCTCAACGACAGCCTCGGCCACGAGGTCGCCGACCAGTTGCTCAGGGAGATGGCCCAGCGCCTGCGGCGCACCGCGCCGGAAGCCAACACC CTGGCGCGTCTGGCCGGCGACGAGTTCGCCATCCTCCTCGATGGCGGCACCGGCACCGCGGCCCTGTCGCGCCTGGCCGAACGCCTGCTGGTCCAGTTGC GCCAGCCGGTGAGCGTGCTCGGCCACGAGTTGATCCTCGGTGCCTCGCTGGGGATCAGCCTGTTTTCCGAGCAGGCACGGGAAATCTCCGTGCTGATGAG CCAGGCGAACCTGGCGATGCAACATGCCAAGCAACTCGGCGGCAATACCTTCCAGTTCTTCCGCGACAACCTGCAGGACAGCACCCTCGAACGCCTGCGC CTGGAAACCCGGTTGCGCAAGGCGGTCGAGGAGGGCCAGTTGGACGTGCATTACCAGCCCAAGCTGTGCCTGGCCAGCGGCCGCCCGGACTCGGTCGAGG CGCTGGTGCGCTGGCACCATCCGGAGGAGGGTATGATCCCGCCGTCGACCTTCATCGGCCTCGCCGAGGAGTGCGGGTTGATCGGCGAGATCGGCGAATT CGTCCTGCGCCGGGCCTGCCTGCAGGCCGCCGAGTGGAGCCAGCGGGGCCTGAACCTGCGGGTCTCGGTGAACCTCTCGGTCCACCAGTTGCGCCAGGGC GACCTGCTCGACGTAGTACGCTCGGCGTTGACCGACAGCGGCCTGCCGGCGGCGCAACTGGAGCTGGAGTTGACCGAAAGCCAATGGCTGGACGCCCTCG ACAGCGTCCTGGCGACCTTCCGCCAGTTGCGCGAGATGGGGGTGAAGCTGTCGGTCGACGACTTCGGCACCGGCTATTCCTCGCTCAGCTACCTGAAGCG CCTGCCGCTGGACTACCTGAAGATCGACCAGTCGTTCGTCCGCGACCTGACCCAGAACAGCGAGGATGCGGCGATCATCCGGGCGATCATCGCCATGGCC CACAGCCTCGACCTGAAGGTGGTCGCCGAAGGCGTGGAAACCATCGAGCAGCGGGACTTCCTGGTGGCCCAGCGTTGCGACGAGCTGCAGGGCTACCTGA TCGGCCGGCCGTTGCCGGCCCATGCCCTGGAGGAAGGTTTGCGCCAGACTCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCGATCCGGCGGAGTATGCTGTAGCACTTTCGACTCCCACGAATTAAGGACGATTCATGCGCTCGAAGCCGCTTCTTCCCGCCCTCCTGCTGGTGGGC GCCGGTCTCTCCCCGCTGGCCCAGGCCAGCAGCGACGACTCCTGCTATCCCGATTGGTCGCTGGTCGGCGGCGGTGTCTGCGATACCCTGCCGTTCCTCG CCCCGGGCAACGACACCCGCGCCAACCTGCGCCTGCTGCTGGCCGACGCCGGCCACTGGCGGTTGGTGGAGGCGCCGCCGTCGGAGGAAGAGAAGCTCGA AGGCTACGGTCTGGTGCCGTTCGGCCTGTTCCGCCTGCTGCCCGGCGACGGCAGCCAGCCGCCCGCGCCGCCGGCGACGAGCGAAGTCGAGACACCGCCG GCGGCGCCAGCGCCCTCGCCGCTCGCCGAACTGGCCCGGCAGATGGGCGCCGAAGCGCTACCGGAAAAGATCGCCGGTGCCGAATTCTTCGAGGGCGAGG
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| Amino Acid Sequence |
>diguanylate cyclase
MTVHVEPLALPGGSTDVLRLYAREIAIERTRLLYLGSRTPTLLMLLGGVISACLVWGKVSSWLLGGWLVWLVLLAVLRLLQVAAFQQADSRRQASRHWRR TFLCGAGASGLTLAFAVIMLVPADAFLQQVLVFGLVAAAILSASVAYAVSLPAFLTFALPGLLPSIVFLLLQPHSLLQGWGVLGLILLVALLVVAGQIHR LVQGALLRRFQTQALNLHLERVNAEAEALNRKLAQEVGQRRLAERELRAARDALQRRVEARTEELGATSQALSQSEARLAMALEASELGLWDWDLESGRV QHSYLEAVFSDAGDGPEDYRRLIESIHPGDLPRIRRALAEHLKGRSELYRVEYRVRDREGGWRWLEDRGRAMARDPRGRVTRMLGTRSDISARKRLEEQQ QLAATVFEAASESIVILDPAYNLLAVNQAFSRITGYRREDVVGRNASLLVNTPEAQRHYRQIRAELRQHGQWQGELVDTRKNGDPYPQWLQLNLLRDGNG EATHIVGFFTDLSARRDVEERLRHLLHYDELTGLANRRLFRERLHEAAQRARQEESGLALLLIDLDRFKLLNDSLGHEVADQLLREMAQRLRRTAPEANT LARLAGDEFAILLDGGTGTAALSRLAERLLVQLRQPVSVLGHELILGASLGISLFSEQAREISVLMSQANLAMQHAKQLGGNTFQFFRDNLQDSTLERLR LETRLRKAVEEGQLDVHYQPKLCLASGRPDSVEALVRWHHPEEGMIPPSTFIGLAEECGLIGEIGEFVLRRACLQAAEWSQRGLNLRVSVNLSVHQLRQG DLLDVVRSALTDSGLPAAQLELELTESQWLDALDSVLATFRQLREMGVKLSVDDFGTGYSSLSYLKRLPLDYLKIDQSFVRDLTQNSEDAAIIRAIIAMA HSLDLKVVAEGVETIEQRDFLVAQRCDELQGYLIGRPLPAHALEEGLRQTR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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