Strain | Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCGACGCGTTGTTCGCAGTACAACCGCAGGCGGCCCTGGGAGCATTCGAAATCGCTGTTTCCCGGAGCCGCGCCGACGCCCAGGCGTAGCTCGGCGAGC CGGTTCTCCGCTGCCAGCAGGGCCAGCGACTTGTCGCGTAACAGACCGTTGCCGTCGGTCATCAGGCCCACCGCGCGAATCGCCGCGGCCAGGGCGATGG CGACGATGGCCAGCGCGACCAGCACTTCGATCAGGGTGAAACCGCGGGAAGACAGGCGCCTGGACATCGCGGGAAGGTCGGCGAAAGGGGACTTCCAGGC TAGCCGGGAAATCTGACCGATTCCTGACAAAAGCTCGGGAGGGCGCTCCCGCGAGCCATCCCCGGCGCCTGCCGGAAAGCCTGGCTCCAGGGCCTTGCGG GCGCCTCCGGAAGGGCGGCGCACCCGAGGATTTTCAATATCGTTGACATATCTTCCTGAAACAATCCGCGGCGAATCGAACCATGCCGAGGAGTGTCGAG
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DNA Sequence for Gene |
>NT33_RS24685
ATGGATGTCGTGCAGTTCAGCTCCAGCCCGAAAGGACATCGGGGACAGCGGGGCTTCACCCTGATCGAGATCATGGTGGTGGTGGTGATCCTCGGCATCC TCGCCGCGATGGTGGTGCCCAAGGTGCTCGACCGTCCCGACCAGGCCCGCGCCACCGCGGCACGCCAGGACATCTCCGGGCTGATGCAGGCGCTCAAGCT CTACCGCCTCGACCAGGGCCGCTATCCGAGCCAGGCGCAGGGGTTGAAGGTGCTCGCGGAGCGCCCTGCCGATGTCTCGGCGAGCAACTGGCGCTCGTAC CTGGAACGCCTGCCCAACGACCCCTGGGGCAAGCCCTACCAGTACCTGAATCCCGGCGTGAACGGCGAGATCGACGTGTTCTCCCTCGGCGCCGACGGGC AGCCGGGCGGCGAGGGCATCAACGCCGACATCGGCTCCTGGCAGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCGCCATGAACGGTCGTCGCCAGCGCGGCATGGCGATCATCAGCGCGCTGCTGATCGTCACCGTGGTCGCGGTCATAGCCGCCGGCCTGATCGCCCGC CAGAGCGCATTCATCCGCGCCCTGGAAAGCGAGCAGCTGCGCATCCAGGCCGGCTGGATGCTGCGCGGCGGCCTGGAATGGAGCCGCCAGTTGCTGCTCG AGGACAGCCGCCGCGACCCGCTGACCCGCCTCGACCAGCGCTGGGCGCAACCGATGCGTGACTTGCGTCTGGGCAGCGCCGAATTGCCGTTCAACGGCCA ACTGGAAGACGAGCAGGGCAAGTTCAACCTGCGCAACCTGTTGGTCGACCAGCGCCCCGATCTCCAGGCGCGAGCGAACTTCGAACGCCTTGCCGGTCTG CTCGGCGTGCGCCCGAAGGAGACGCGGCTGATCGTCGAGCGGGTACTCGATTCCTATGCACGGCTGCCCGCCGAAGCGCCGCCGGCCGATACGCAACCCG
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Amino Acid Sequence |
>general secretion pathway protein GspG
MDVVQFSSSPKGHRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGRYPSQAQGLKVLAERPADVSASNWRSY LERLPNDPWGKPYQYLNPGVNGEIDVFSLGADGQPGGEGINADIGSWQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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