Pseudomonas aeruginosa AZPAE15017, NT33_RS24305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAGCGCTCGACTTACTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGACTGGTTGGAGCGGGCCATCGAGTCGATCCGCGCGGGCTACCGCTGCCTGC CGTTCGAGCAGGAGGAACAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGCCGCGCCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCGGCGCCGGCGA ACAAGCGGCGGCTGATTGGCTGGAGCGCGCCATCGTCGCTTCCGACCCGCACCTGCCGTTGCTCGCCCGGCAACGCATGAGCGGGCTGGCGCGGCAGCCG ATGAATCGCCAGGAACAGGTGGCCTACAGCGTCGGCGACGACACCCGTTTGTTCGTCGTGCAGGGCGCCGGCGACTGGTTCGATGCCGGCCAGCCGCTGC GCATCGTCGCGCCGGTCAGCGGGGTTGCCAGCAATCCCTGGCAGATCGTGCTGTTCGTCGCCGACGGCAGCGACAACACCTAGACAGGAAGGAGCCGCCA
DNA Sequence for Gene
>NT33_RS24305
ATGCCCGAAGGGAGTGCAGGGCCTTTTCCCCAGGCGTATCTGGAACAGCCGCTCAGCTCGGCGTTCCGCCAGGCCTGGCAGGAATGGCTGGAGGCCTGGG GCGCCCTCGACCGGGACGCCCAGGATGTGCCGCGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGCATCACCCGGCGTCTGTGGCGCAGCGCCTTCGC CAGCGTCGGCGACGCGGCGGGCATGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACCCTGGTCTTCAGCGCCTGGCCGGGGCAG GGCGCCTGGCAGGACAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCGCCTGCTCGACGAACGCG CCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCCTGCGCGGGCCGCGCGGCGAGGCGCTGCACGAGAA GTGGCGGCAGGCGCTGTTCGCCTTCGCCTGGCAGCGCGAGGCGGACGCCGCCGACCTCGGCCGCCGCCTTGAGCAGCCCGCCGCTGCGCCGCCACGGCGC CTGCCGGTGCGCGCGGCGCTGCCGGACGGCTTCCGCCTGGGCCTGGCGGTGCTCGGGCTGGTGCTGCTGATGAGCGGTATCGGACACCTGTTCTGGCGCG ACATCCAGCACGAAATGGCGGCGGTGACCCACCTGGCCGATCCGGAGCAGGCGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGCGACGCTGTTCATGCTGGTTCTCCTCCTGGTGCTGCTGGCGCTGCTGCTGGGGGCGCTGGGCTGGTGGTGGCGAACCCGCGGTGGTACGGAGAT CCGCAGCTTCTACGCGGCGGTCCGGCAGATGGAGCGTGAGCAGGGCTGGCAGGGCCGCTACGAAGCGCCGTGGCTGCTGATGCTCGGCAACGAGACCGAG GGCGAGCAGTTGTGCTCCACCTGGCGCCTGCTGCCGGTGGCGCGCCCGGCCTGGTTCGGCCGCTGGTGGTCGGACGGCGAGGGGGCGATCCTGCTGGTGC CCGAGTCGGTGTTCCTGCCCGACGAGGGCCTGCGCCGGCAAAGCGGCGCCTGGCTGCGCCTGTTGCGTCTGTTCCTGCGCCTGCGTGGCAGGCGCGCGCT GGACGGAGTGGTCTGGAACATTCCGCTGGCGCGGCTGCAGGACGGCGAGCAGGCGGCCAACCTCGGCCTCGCCGCGCGCCGTCGCTACGTGGAACTGACC
Amino Acid Sequence
>type VI secretion system protein ImpK
MPEGSAGPFPQAYLEQPLSSAFRQAWQEWLEAWGALDRDAQDVPRMVERALELSTRITRRLWRSAFASVGDAAGMQVKAMVYAFVALVDETLVFSAWPGQ GAWQDKPLESHLYGSRQAGEYLPLAIKRLLDERAPASRDLANVYLQCLILGFRGRLRGPRGEALHEKWRQALFAFAWQREADAADLGRRLEQPAAAPPRR LPVRAALPDGFRLGLAVLGLVLLMSGIGHLFWRDIQHEMAAVTHLADPEQAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site