Pseudomonas aeruginosa AZPAE15017, NT33_RS20540

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCTGAGCGGCGGCGGAAAAAGCTTGCTGCGCAAGGAGAAGCGCCTGCGGGTGAACATGGAAATTGCCCGGGAAACGTCGACGATGATTATTCGTTGAAT AACGGGGAAGTGCATACTTCCAACTTGGAAGTTAACTGCATGGCACCATCCATGCATTACACGGATGACGGTTTTTATTATAAGTCCAAACTGGCGAAGC CAAGCAAGAGAGGCCGGGAAGCCAGAGTTCCATAGTCGGAAATACAAGCGTTGCAATGTCGACGGATAGCGCGAAGAGGCGGCGGTACCCCGCGAAACGA GGCAGTTCCCCGAATGACGGGCACTCGAACGGATTTATAAGTCCGCCGTTCGGCGTTCACCTCGATGCCCGTGCACGGGATACTTATATCGGTGGTTCGC ACCACTGATTATCGATTTGAACTCGTTCGAGTCTTTACCGCGTTCCCGGCCGAAATTAAAGGCGGGTGGACGATTATTGCCTCACACAAGGAACATAGGC
DNA Sequence for Gene
>NT33_RS20540
ATGACCAGAACTTCGAACCCATGCGCAGTGGTATTGGCCTTTGCGGCAATTGCCGCTTCGGGAACCGCGATGGCGGCAAACACTATCACATTCAGCGGCG AAGTGACCGACCAGACCTGCCAGGTCGCGGTCAACGGCTTCACCGACCCCACGGTGATCCTCGACAGCGTACCGGTGAGCGCCCTCGATGGCGCAGTGGG CCGCAGCGCCGGTGAAACCGCGTTCACCCTGCAACTCACCGATTGCGTTGCGCCGACAGCCGACGAGCACTTCACCACCCTGTTCCAGGCGACCAATCCC AGCGCCGCCGGGAACCTGGTGAACACCGCCGCCAGCGGCGCGACGGGCGTGGCGCTGCAATTGCTCGATAGCGTCGGCGGCAACCCGGTCGACCTGGCCG GCGGCGCGGCGGTGCCCGCCGGCGACATCGTGCTCGCCAACGGAGCCACCAGCACCAGCTACGACTACGCGGTGCAGTACGTCTCCGAAGCGGCGACCGT GACGCCCGGTCCGGTACTCGGCGCCGTGACCTACACGCTGCGTTACGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGCCGGCGGCGCATGCGCCGCCCTTCCTTTTCCCAGCACTCAAGCCGGGCCCGGTCGCTGGACCGTGCCCGGCCAGGTAAGCCGCATGCCCAGACATTC GTACCGATCCGGCAGGACATCGGCGCTTCTGCTCGTCCTGCTGGTGAGCATCGCCCAGGCGCGGGCAAGCGTGGTGGTGACCGGGACCCGGGTGATCTAT CCCGGCGAGGCACGGGAGAAGACCGTGCAACTGAGCAATCGCGATGCGTTTCCCAACGTCGTCCAGGCCTGGGTCGACATCGACGCCCCGGATGTGCCGC CGGACCAGGCGGACGCGCCGTTCCTGGTCAACCCGGCGGTATTCCGCATGGCCCCGGACAGCGGCCAGACGCTGCGCATCGTCTACACCGGGCAGGGCCT GCCGGGCGATCGCGAATCGCTGTTCCATCTCAACGTCCTGCAGATCCCTCCACGCAACAGCAGCCATGCGGAGCGGAACCAGATGCTGCTGATGCTGCGC
Amino Acid Sequence
>fimbrial protein
MTRTSNPCAVVLAFAAIAASGTAMAANTITFSGEVTDQTCQVAVNGFTDPTVILDSVPVSALDGAVGRSAGETAFTLQLTDCVAPTADEHFTTLFQATNP SAAGNLVNTAASGATGVALQLLDSVGGNPVDLAGGAAVPAGDIVLANGATSTSYDYAVQYVSEAATVTPGPVLGAVTYTLRYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site