Pseudomonas aeruginosa AZPAE15017, NT33_RS17280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15017 AZPAE15017_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGTGATGCTGAAAGTTTTGTACGGGTTGAAGAACTTTGAGGGCAAGTCGAAGTTCAAAACATGGCTATATAGCATCACGTACAACGAGTGCATCACCCA GTACCGCAAGGAGCGCCGCAAGCGCCGATTGATGGATGCGCTCAGCCTCGATCCGCTGGAGGAGGCTTCCGAGGAGAAGTCGCCGAAGGTTGAGGAGCGG GGCGGATTGGATCGTTGGCTCGTCCATGTCAATCCGATAGATCGGGAGATTCTGGTTCTTCGCTTCGTCGCGGAACTGGAGTTTCAGGAGATAGCGGATA TCATGCACATGGGTCTGAGTGCGACGAAAATGCGCTACAAGCGGGCACTGGACCGCCTGCGCGAAAAGTTTTCAGATGCGACCGAAACATAGTTGGGTAA ATATTGTCTCTCTATGCGGGAAGTTCTGATAAACTTGCCACCCAAGTTGTGCGGCTGATTGTTGGACAACTAACTGACCATCAAGATGGGGATTTAACGG
DNA Sequence for Gene
>NT33_RS17280
ATGAAACTGAAGAACACCTTAGGCGTTGTCATCGGCTCGCTGGTTGCCGCTTCGGCAATGAACGCCTTTGCCCAGGGCCAGAACTCGGTAGAGATCGAAG CCTTCGGCAAGCGCTACTTCACCGACAGCGTTCGCAACATGAAGAACGCGGACCTGTACGGCGGCTCGATCGGTTACTTCCTGACCGACGACGTCGAGCT GGCGCTGTCCTACGGTGAGTACCATGACGTTCGTGGCACCTACGAAACCGGCAACAAGAAGGTCCACGGCAACCTGGCCTCTCTGGACGCCATCTACCAC TTCGGCACCCCGGGCGTAGGTCTGCGTCCGTACGTGTCGGCTGGTCTGGCTCACCAGAACATCACCAACATCAACAGCGACAGCCAAGGCCGTCAGCAGA TGACCATGGCCAACATCGGCGCTGGTCTGAAGTACTACTTCACCGAGAACTTCTTCGCCAAGGCCAGCCTCGACGGCCAGTACGGTCTGGAGAAGCGTGA CAACGGTCACCAGGGCGAGTGGATGGCTGGCCTGGGCGTCGGCTTCAACTTCGGTGGTTCGAAAGCCGCTCCGGCTCCGGAACCGGTTGCCGACGTTTGC TCCGACTCCGACAACGACGGCGTTTGCGACAACGTCGACAAGTGCCCGGATACCCCGGCCAACGTCACCGTTGACGCCAACGGCTGCCCGGCTGTCGCCG AAGTCGTACGCGTACAGCTGGACGTGAAGTTCGACTTCGACAAGTCCAAGGTCAAAGAGAACAGCTACGCTGACATCAAGAACCTGGCTGACTTCATGAA GCAGTACCCGTCCACTTCCACCACCGTTGAAGGTCACACCGACTCCGTCGGTACCGACGCTTACAACCAGAAGCTGTCCGAGCGTCGTGCCAACGCCGTC CGTGACGTACTGGTCAACGAGTACGGTGTAGAAGGTGGTCGCGTGAACGCTGTTGGTTACGGCGAGTCCCGCCCGGTTGCCGACAACGCTACCGCTGAAG GCCGCGCTATCAACCGTCGCGTTGAAGCCGAAGTAGAAGCTGAAGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCTGAGCCTCTAAGGAAAAACCCGGCCCAGGCCGGGTTTTTCTTTGCCTGGAAAAAGACCGCTCGTCAGGCGCTCAGGGAAATCGGTTGCGACACGA TGTCGCGGGTTACTTCGCCGATCACCAGGATCGCCGGGCTTTTCAAGGCGAAACGTCCGGCGTCCCGCAGTAGCTCGCCGAGGTCGCTGCGGCATTCGCG CTGGTTGCCCAGGGTGGCGTTCTCGATCATCGCCAGCGGCGTATCCTCGGCCATGCCTCCAGCCAGCAGCCCGGCCTGGATCTCCGCGAGACGGGCGACA CCCATGTAGACCACCAGCGTGGTACCGCTGCGTGCCAGGGCTTCCCAGGCCAGCGGGCTGTCGTCCTGGGTATGCGCGGTCACCAGGGTCACGCCGCGGC TGATGCCGCGGTAGGTCAGCGGTATGCCGCAGCCAGTGGCGCCAGCCAGCCCGGCGGTGATGCCGTTCACTATCTCGCTGTCTATCCCGTGCTGGGCCAG
Amino Acid Sequence
>porin
MKLKNTLGVVIGSLVAASAMNAFAQGQNSVEIEAFGKRYFTDSVRNMKNADLYGGSIGYFLTDDVELALSYGEYHDVRGTYETGNKKVHGNLASLDAIYH FGTPGVGLRPYVSAGLAHQNITNINSDSQGRQQMTMANIGAGLKYYFTENFFAKASLDGQYGLEKRDNGHQGEWMAGLGVGFNFGGSKAAPAPEPVADVC SDSDNDGVCDNVDKCPDTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAYNQKLSERRANAV RDVLVNEYGVEGGRVNAVGYGESRPVADNATAEGRAINRRVEAEVEAEAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site