Pseudomonas sp. UW4, PputUW4_05379

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. UW4 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AGCTTCATGACGGTCGGTGAGGGTGCTGACGATGTCGAGCAGTCGCCCGCCATCGCTAAAGGTTTCGGCTCGGCCATAGGCGTGTACGGCGACGTAGTTC CAGGTTGGCACGACTTTGCCGTGTTCGGCCTTGCTCGGGTAGAAGCCGGGGCTGACGTAGGCGTCGGCACCGGCAAAAATCAGCAGGGCCTCGGCACCGT CGCGCAGGTCTTTCCACTGTGGATTGGCTTTGGCCAGATGCCCGTACAACGTGCCGTTCAAGCCTTGTTCGCAATGCAGCAGCACCGGCACATGACTGGC TTGCAGGCCGCTTTCGCCGTGGGTCACCAATATGGCGAGACGGGTGGCGAGGATCAGTTCATGCAGTTGGGACAACTCGTCGATGGCAAAAGCGCGCGGC GTATACATGGAGATATTTTCCTTGGCGAATGTCTTCATCCTAGGCAGGCTATTGGTCTGTTGTAAGAGCCATTAATGACCAATTTCATAGGTCCATTGTC
DNA Sequence for Gene
>PputUW4_05379
ATGACGGATGCGCCGCTTTCCCTGTCGTTCAACCCGGCCGGTATCGAACTCGACCGTCGCCAGGGGTTGAGTCGACAGCTCTATCAGGCCTTGCGCCTGC GCGTCCTCGACGGACGATTGGCCAGTGGAACGCGTCTGCCGGCCAGTCGTGACCTGGCCGCAGCGCTGGCGATTTCCCGCAACAGCGTGGTGCGTGCCTA CGATCAGTTGTACGCCGAAGGCTTCATTGAGGGGCGAGTCGGGGACGGCACTTATGTCGCGCAACTGCCTCAGGCGGCGTTGCCGGCAAAAAAACTATCC ACAAAAGTATCCACAGACTTTTCAACAGGGTTATCAACAACCTTATCCACAAATTGGCTCGATTTACCTGTGGATCCATCCAGCAAAGTTATCCACAACG ATCCGTTGGCTCGGGTAAAAAACAACCATTTACCCAGTCCGCCGAGCGGACCGCCGCGGGCATTTCGGGTCGGTATTCCGGCGTTCGATCTGTTTCCATT CGAGGTCTGGGCCAAGCTGAATGCGGCTTTCTGGCGCAAGCCGGATTTGCAGCAGCTGTGCTATGGCGACCCGGCTGGCGATGCGCGCTTGCGCGGGATG ATTGCTGCGTATTTGCGCAGTTCCCGTGGCATGCAATGCACGGCTGAACAAATTGTGATCACCAGTGGCGCGCAGCAGGGGATCAGCCTTTGTGCACAGC TGTTGGTGGAGCCCGGTGATGGGGTAGCGCTTGAAAATCCCGGGTATCGGGCGGCCGGTCATGCGTTCGCCGTGGCAGGTGCGAAGTTGCATGGGGTGGC AGTGGATGGCGAGGGCATCGACTGCGCTGAACTGGCACAGCTGCGTGATTGCCGTTTGACCTACGTCACCCCGTCCCATCAGTACCCCACCGGCGTGGTG ATGAGCCTGGCTCGCCGCCTGGAGTTGCTGGCCTGGGCCGAGCGCACCCAGGGCTGGATCGTCGAGGATGACTACGACGGCGAGTACCGCTACAGCGGTG CGCCACTGGCGCCTTTGGCGGCACTGGATCGGCAAGGCCGGGTGCTCTACGTCGGCACGTTCGGCAAAGTGGCGTTTCCGGCGTTGCGCCTGGGTTACCT GGTGTTACCGACAGGGCTGGTGCAGGCTTTTGCCCAACGCCGTGCCGTGGACGTACGCCACTCCGAGGTCAGTACCCAGGCGGTGATGGCCGAGTTCATG GCGGCCGGGCATTTCCAGCGGCATATCCGCCGCATGCGCCGTGCGGCGTTGAGTCGCCGTAACACATTGCTCAATGGCTGGCTGCGGGAGATTCCCGGGG TCGGACCATTACCCACCGTCGCCGCCGGGCTGCACATGACCGTCCCCGTCGATAGCGTGGCGCGTGAACGTGAATTGATCGAGTTGGCGCAAAGCGTCGA TGTCGAGATCAACGGCTTGAGCAGCTATTGGTTGCCCGACTCCACGACACCGATGGATCAGCGAGCGGGGCTGGTACTGGGCTTCGCCGCCGTGCCCGAA AAATCGATTGAGTCTGCGCTGGAGCGATTGCGGGCGGTGTGGCGTGCTGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACGCGGGTAAAAAAAGACCTGCGTAAATGCAGGTCTTGATGATTACGGGAACGACGCGGTTGTCAGGTACCGGACTTGATCTTGGTCCAGGCCCGGGTC CGCGCACGTTCGGCATCGCGCGGCAGCGGTTGCAGGGTGTAGAGCGTGCTCATTGCCGCTTCGGTCGGGTACAGGTTCGGGTTGTTGCGGATCGCCGGAT CGACCATTTCCGTGGCGTCCTTGTTCGGGTTCGGGTAGCCGACGAAGTCACTGACCGGGGCAATCACCTGGGGTTGCAGCAGGTAGTTGATGAAGGTGTA GGCGTCTTCCGGATTCTTCGCGCCCTTGGGTATTGCGAGCATGTCGAACCAGATCGGTGCGCCTTCCTTCGGCAAGCGCATGTCGACGATCACACCGTTC TTGGCTTCCTTGGCGCGGTTGGCGGCTTGCGAGAAGCTGCCGGAATAACCGACCGCGACGCAGATGTCACCGTTGGCAATGTCGGCCATGTACTTGGACG
Amino Acid Sequence
>GntR family transcriptional regulator
MTDAPLSLSFNPAGIELDRRQGLSRQLYQALRLRVLDGRLASGTRLPASRDLAAALAISRNSVVRAYDQLYAEGFIEGRVGDGTYVAQLPQAALPAKKLS TKVSTDFSTGLSTTLSTNWLDLPVDPSSKVIHNDPLARVKNNHLPSPPSGPPRAFRVGIPAFDLFPFEVWAKLNAAFWRKPDLQQLCYGDPAGDARLRGM IAAYLRSSRGMQCTAEQIVITSGAQQGISLCAQLLVEPGDGVALENPGYRAAGHAFAVAGAKLHGVAVDGEGIDCAELAQLRDCRLTYVTPSHQYPTGVV MSLARRLELLAWAERTQGWIVEDDYDGEYRYSGAPLAPLAALDRQGRVLYVGTFGKVAFPALRLGYLVLPTGLVQAFAQRRAVDVRHSEVSTQAVMAEFM AAGHFQRHIRRMRRAALSRRNTLLNGWLREIPGVGPLPTVAAGLHMTVPVDSVARERELIELAQSVDVEINGLSSYWLPDSTTPMDQRAGLVLGFAAVPE KSIESALERLRAVWRAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site