Pseudomonas sp. UW4, PputUW4_04779 (dacC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACACCTCCGCCGCAGCAACACGCCGCCGCCGTCGTCCCTGTTCAACTTGCCGACGCAAAAAAAAACGCTTCTGCACCAGCCTCTGGCCAGTATCTGCAGG TGGGCGCGTTCGCCAACCCGGACGCTGCAGAACTGCTGAGGTCGAAGCTCAGCGGGATGGTGAGCGCCCCGGTGTTCATCAGCTCGATCGTGCGCAATCA GCAGACCCTGCATCGGGTGCGCATGGGACCGATCGGTTCGCCGGGTGAAATTGCCCAGGTACAGAACAGCGTGCGCCTGGCCAACCTTGGTTCGCCAAGT GTGGTCACGGAGTAAGCAACACGTAGAACTTGATTGACGATTCACCAGCGATTGGGGGGTGAATCAGGTTGTTGGCTCGTTGAAGAACAAAAGCCCGGCA AGGGTTACAGAGTGAGCAACTGAACACGCGATGACTCGTTAGAAAGTCATCTGATTAGTTTTGCCCTCGGGCAGTTTCCATTAGCGATTTCGAGAGACGG
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| DNA Sequence for Gene |
>PputUW4_04779
|dacC
ATGAACATCACCACCTTTGCCAAACGCCTGTTCCTGTTAGTCCCGCTGCTTCTCTCACCCGCCGCTTTTGCGGCCGAGATGATGCCTTCGCCACCACAAT TGGCTGCCAAGGCCTACGTGCTCATGGATGCCAGCAGCGGCAACGTGCTGGTCGAGAACAATGGTGACCAGCGTCTGCCACCGGCCAGCTTGACCAAGCT GATGACCGCGTACATTGCGACCCTGGAAATCCGTCGTGGCCAGATCGGTGAAAACGACCCGGTGACCGTCAGCGAAAACGCCTGGCGCACCGGTGGTTCG CGGATGTTCATCAAGGTCGGCTCGCAGGTGACTGTCAGCGACCTGCTGCATGGCATCATCATCCAGTCGGGCAACGACGCCAGCGTTGCGCTCTCCGAGC ACATCGCCGGCAGCGAAGACGCCTTCGCCGACATGATGAACAAGACCGTGGCTGACCTGGGCATGACCAACAGCCACTTCATGAACCCGACCGGTCTGCC GAATCCTGAGCACTATTCGTCGGCTCACGACATGGCTGTTCTGGCCCGCGCGATCATTCACGAAGACCCGGCTCACTACGCGATCTACTCGCAGAAAGAG TTCTTCTGGAACGGCATCAAGCAACCCAACCGTAACCTGCTGCTGTGGCGCGACAAGACTGTCGACGGCCTGAAGACCGGTCACACCGATGAAGCCGGCT ACTGCATGGTGTCTTCGGCCGTACGTGACGGCATGCGTCTGATCGCCGTGGTGTTCGGCACCAACAGCGAAGTGGCCCGTGCCGCCGAAACCCAGAAGCT GCTGACCTACGGTTTCCGTTTCTTCGAAACCCAGACCTTCTATCAGAAGGGCACCGAACTGGCCCAGGCTCCGGTCTGGAAAGGCGCCACCAACCAGGTC AAGGCCGGTCTGGCTGAAGACCTGACCATGACCCTGCCAAAAGGCCAGCTGAAAAAGCTCGCCGCCAGCATGACCATGAACCCGCAACTGATTGCGCCAA TCGCCAAGGGCGACGTGATCGGTAAAGTCGAAGTCAAACTGGAAGACAAGGTGGTGCACAGCGCCGACTTGATCGCTCTGGATGGCGTCGAAGAGGGTGG TATCTTCCGTCGCATGTGGGATAGCATCCGTCTATTCTTCTACGGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGTGTGCTCCTGCAAAACCCCGTGCTGATCCGGCGCGGGGCTTTGCCGTCGCCACGGCTTACGCTTACGAGGCCGTTACGCCATGACCGATACCGAAGT AAAGGCGCCAAAGATCGAATTCCCTGCCACTGATTATCCAGTCAAGGTGATCAGCGACACCGGCGTGGGCAACAAGGACAGAATCATCGACATCGTCAGC AAGCACGCCAAGATCAACGACGAGCGTATTGACGAGCGCCAGAGCAGCAACGGCAAATACACCACCATTCAGTTGCACATCGTCGCGACCGACCAGGATC AGCTGTACAACATCAACAGCGAACTGCGGGCCACCGGTTTCGTGCACATGGTGTTGTGATGTCCGGCACGCTGGGCTTTCGCGAGCTCGGCCAGATGGCT TACGAGCCGGTCTGGCATGCCATGCAACGCTTTACCAACGAACGCGGCACCGATGTTGCCGACGAGGTCTGGCTGGTGGAGCACCCGGCGGTGTTCACCC
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITTFAKRLFLLVPLLLSPAAFAAEMMPSPPQLAAKAYVLMDASSGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGSQVTVSDLLHGIIIQSGNDASVALSEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMAVLARAIIHEDPAHYAIYSQKE FFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRLIAVVFGTNSEVARAAETQKLLTYGFRFFETQTFYQKGTELAQAPVWKGATNQV KAGLAEDLTMTLPKGQLKKLAASMTMNPQLIAPIAKGDVIGKVEVKLEDKVVHSADLIALDGVEEGGIFRRMWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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