Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AAAACTCCTCGGGCAATTGCAGATGGCTTTTCATCCAGCGCTCGCACGCGGCATGGGCCAGGTTCAGGTGCAGCCAGAGAAACTGTTCGTCACTTTCCGG TTGTTGCAGGTACTGCAAGGCTTGGGCGGAGTTGATTTCCCGACCGGCCTCACCGGGGCGAAAACTGAAACCGTAAAGAAGGCCGAACAGATCCGTATCG CGATGACTGTGATCGATGCTGTGGTTCATTAGGACTCGCAAGGGAGGCGCCTGTCGCGTGTTTTACAGGTTCACTTGAGCGGCATCATCGCAAGCCTGGA TGACGTTTTTGTGACAGAAAAATAACGCAAACGAATGCTCTACCGGTGGTCGGTTTTTTCTAAAGAATCGCTCTGGCACGCCGATCACGCTTGGGTTAAG TTGCGCGCCGCAGGCCTCGGCCGAGACCGCAGACAGGGATGTCCGGACACCTTTCACGCCTTTTTGGGGCGTGCCTCATTCCTGTCATGAGTACCCATCG
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DNA Sequence for Gene |
>PputUW4_04207
ATGCTTTTGCAAAAGTCCTTGAGAGCACAAATTCTCGCCCTGCTGAGTGGCAGCCTGCTGGCGATGCTGTTGATCGCCCTGGCGTGCTTTCACTTCCTGT CCAGTGGCGTGCAGAGCTACGCCAATCTGATCGAGGGCCCGCTGCATACCTCGCAATTGATCGATGAAGCCAACCTGCAATTCAAGGTGCAGGTGCAAGA GTGGAAAAACGTCCTGTTGCGCGGCAAGCAACCGGCGGACTTGAGCAAGTACTGGGGGCAATTCGAAGAGCGTCAGCGCGATGTGCAAAACATCCTTGGC GAGCTGGCCGCGCAGAAAGGCATCGAGCCTCAACTCAAGACGCGCATCGAGCGTTTGCGTGACGAGCATCGTCAGTTGGGCGTGGCCTATCAGAAGGGCC GTGATGCGTACGTGGCCGCCGGGGGGGATCCATCGGCGGGCGATACGGCAGTCAAAGGCGTAGACCGCGCGACCAGCGATCAGATGAGCGCACTGGTCAG CGAGTTGCGCAAGCAGGGCGCCGAACAGTCGACCTTGATCAGCGCCGCCGCCGATCGCACGGTGCTGCTGGGGCTTGTCGTGATGCTGGTTTCGGGGTTG TTGATCGGCCTGCTGAGCCTGTGGCTGGTCAACCGCAATCTGGTCGAACCGATCCGCAAACTGATCGACTACGTGGCGCAACTCAGCCAGGGTCGTCTTG CCGAGCGCGTGGCCAGTACCCGACAGGACGAGTTGGGCAAACTGGCGATCGCCGCCAACACCCTGCGCGATTTCCTCGCCGAAACCTTCAGCCGTTTGCA GCGCAGCGCGACGGATCTGGATAGCGCCAGCGGTGAGTTGAACTCGATCGCCACCGTGATGGCCGGCGGCACCAACGAGCAGTTCAACCGCACCGATCAG GTGGCCACGGCGATGAACGAAATGTCCGCCACGGCGCAGGAAGTGGCGCGTCATGCCGCGCAAGCGGCGCGGGCCGCCGACGATGCCGACCAGTCCGCCC AGCAGGGCGAAAAAGTCATGCAGGGCACGATCCACACCATCACCCAAATGCGTGGCGAAATCGCCAACACCGCCACGGTCATCCGCCAACTGGAAACCGA CAGCGGGCGCATCGGCAAGGTTCTGGAAGTGATTCGCGGCATCGCCGAACAGACCAACCTGCTGGCGCTCAACGCGGCCATCGAAGCGGCCCGCGCCGGT GAGGCCGGGCGCGGTTTTGCCGTGGTGGCCGATGAAGTCCGCAGCCTGGCCCAGCGCACGGCGGCGTCGATCATCGAGATCAACCAGATCATTCAAACCG TGCAGACCGGTGCTATCGAAGCAGCCCAGGCGATTGAAAGCGGTCAGTCGCGCAGCGAAGAAAGCGTGCAGCAGGTGACCGAGGCCGGCGCCATGCTCGA ACGCATCACCCTGGCCGTGGAAGCCATCCGCGACATGAACCGGCAGATCGCCACCGCAGCCGAAGAACAGACCTCGGTGGCCGAAGACATCTCGCGCAAC CTCACCGAGATCACCAGCATCGCCAGCACTAACCTTGACAACGTGCAGCGCACCGAAGCGGCGAGCAACAACCTGCACGGCTTGTCGGGGCAGTTGAACG AGGTGACGGCGCGCCTGAGCGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGCAAAAAGCCGCACGATCGTCAGAGCGTGCGGCTTTTTGTGTGTTGCGATTACTTGTCTTGCTTGTTTTCCAGGACCTTGCCGTTAGAGGCATCGATG TCCACATCCCACTCGACGTTCTTGGCGTCGCGCAACTCGATCTCATACTCGTAACCGTTGAAATGGTTATCCAGCTCGGTTTTGGTGATCGTGGCGCCCG GGTGCAGATCCAGAGCGATCTTGTTCAGATCTTCCAGAGGCTTGATCTTGCCGTCCTTGACCAGTTGCGGGATCTGATCCACGCGCACGTCGGCCTGGGC CAGACCGGCAGTGAGGGTCAGGGTTGCAGCGGTAAACAAAGCAGTCAGAGTCTTCATGGGCTTCTTTCCTTGGGTGATCTGTTCAAGTGAGATCAGGTTA GCTTTTGTAACTTAAGCCACCCTTAAAACCCTCTACATGTCCTGCATCAACTCCTGTGGGAGCGTGGCTTGCCCGCGATAACGGAGTGTCAGTCAGCGTT
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Amino Acid Sequence |
>chemotaxis sensory transducer protein
MLLQKSLRAQILALLSGSLLAMLLIALACFHFLSSGVQSYANLIEGPLHTSQLIDEANLQFKVQVQEWKNVLLRGKQPADLSKYWGQFEERQRDVQNILG ELAAQKGIEPQLKTRIERLRDEHRQLGVAYQKGRDAYVAAGGDPSAGDTAVKGVDRATSDQMSALVSELRKQGAEQSTLISAAADRTVLLGLVVMLVSGL LIGLLSLWLVNRNLVEPIRKLIDYVAQLSQGRLAERVASTRQDELGKLAIAANTLRDFLAETFSRLQRSATDLDSASGELNSIATVMAGGTNEQFNRTDQ VATAMNEMSATAQEVARHAAQAARAADDADQSAQQGEKVMQGTIHTITQMRGEIANTATVIRQLETDSGRIGKVLEVIRGIAEQTNLLALNAAIEAARAG EAGRGFAVVADEVRSLAQRTAASIIEINQIIQTVQTGAIEAAQAIESGQSRSEESVQQVTEAGAMLERITLAVEAIRDMNRQIATAAEEQTSVAEDISRN LTEITSIASTNLDNVQRTEAASNNLHGLSGQLNEVTARLSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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