Strain | Pseudomonas aeruginosa strain AZPAE15022 AZPAE15022_contig_31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCAACGTACCGCTGCTGGCGCACATGCTGTTCTGGTACTTCGCCGCGCCGGAATGGCTACCCGAGGACCTCAAGGCCTGGCTCTACGCCGGCAACATCG AGGCCGCCAGCGCTATCGTCGCGCTGACCCTGTACACCGCCGCGTTCATGAGCGAGGACATGCGCAGCGGCATCCGCGCGGTGCCCACGGTGCAACTGGA GGCCGCCCGCGCGCTGGGCTTCGGCTACCTGGCGAGCATGCGCCTGGTGATCCTCCCGCAGGCCTTGCGGATCACCGTACCGCCGCTGATCTCGCAAACC CTCAACCTGTGGAAGAACACCAGCATCGCCACGGTGATCGGCGTCGCCGAGCTGATGTACCAGGCCGGCCAGGTGGAGAGTTCGACCTTCCGCAGCTTCG AGTCCTTTGCCTTCGCCACCGCGGCCTATCTCAGCGTATCGCTGCTGATCACCGGCGCCGCCGCCTGGTACCAGCAGCGCTATCCGGGAGTCGAACGGCG
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DNA Sequence for Gene |
>NT38_RS23090
ATGACCACCCTGGAACTGATCGATAGCTACTGGCTGTACTTCCTCGTCGGCCAGTACCCCAACGGGCCGTTGGGCGGGCTGGCCCTGACCCTGGTCCTGG CCTCGCTGGCGCTGCTGCTGGCGCTGCCACTGGGCATCCTGCTCGGCCTGGCGCGGGTCAGCCCCTGGCGCTGGCTGCGCTGGCCGATCACCGCGCTGGT CTTCGTGGTGCGCGGGGTGCCGTTGCTGATGGTGATCTTCTGGGCCTATTTCTTCCTACCGACCCTCACCGGCCAGCGCACCGACCAGTTCACCACCATG CTGCTGGCGCTTGTGCTGTTCGACGCGGTGTACCTGGCCGAGATCGTCCGCGCCGGCATCCAGGGCCTCGACCGTGGCCAGTTCGAGGCGGCGCGTTCGC TCGGCCTGGGCTACCTGGCGAGCATGCGCCTGGTGATCCTCCCGCAGGCGCTGCGCAACATGCTGCCGTCGTTGGTCAACCAATTCGTCTCGACGATCAA GGAGACCTCCCTGGGCTACATCATCGGCCTGGCCGAAGTCAGCTTCATCGCCTCGCAGATCAATACCCAGGTGTTCACCCTGCCGACCCAGGTCTACCTG ATCCTCGGCCTCACCTATTTCATCCTGTGCTTCGGACTGTCGCGTTTCGCCTTCTGGCTCGAACGCCGCCAGGCGCAGCGCGGCAATCCCAAGGAGGCCC GATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGGCTGGAAAAGGTCAACAAATGGTACGGCGCCTACCACGCCCTGGCGGATGTCGACGAACAGGTCGGCCGCGGTGAGGTGGTGGTGGTCTGCGGACC CTCGGGCTCCGGAAAATCCACCCTGATCCGTACCCTGAACCGCCTGGAACCGATCCAGGGCGGGCGCATCCTGATCGATGGCCAGGACATCCACGCTCCC GGCCTGGACCTCAATCGCTTCCGCTCGCACATCGGCTTCGTGTTCCAGCAGTTCAATCTGTTCCCGCACCTGAACGTGCTGGACAACTGCACCCTGGCGC CGCTCCGTTTGCGCGGCCTGAAACCCGCGGAGGCGCGCAGCCAGGCCATGGCGCTGCTGGAGCGGGTCGGCCTGGCGGACAAAGCGGCGGCGTTCCCCGC GCGGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCGCGCTGGCGATGGAGCCGCCGCTGATGCTGTTCGACGAACCGACCAGCGCCCTCGAC
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Amino Acid Sequence |
>amino acid ABC transporter permease
MTTLELIDSYWLYFLVGQYPNGPLGGLALTLVLASLALLLALPLGILLGLARVSPWRWLRWPITALVFVVRGVPLLMVIFWAYFFLPTLTGQRTDQFTTM LLALVLFDAVYLAEIVRAGIQGLDRGQFEAARSLGLGYLASMRLVILPQALRNMLPSLVNQFVSTIKETSLGYIIGLAEVSFIASQINTQVFTLPTQVYL ILGLTYFILCFGLSRFAFWLERRQAQRGNPKEAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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