Strain | Pseudomonas aeruginosa strain AZPAE15022 AZPAE15022_contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACAACCCCAACATGAAGTTCCTGTTCATCTACGTGGTGCTGTTCCTGGTCGTGCTGCTGGTGCTCTACATCAAGCACCGGCTGACCCGGATGCCGGTCG GGCGCGCCTGGGAGGCGCTGCGCGAGGACGAGATCGCCTGTCGCGCGATGGGCCTCAACCATGTGCTGGTGAAACTCTCGGCGTTCATGCTCGGCGCCTC CACCGCGGGACTGGCCGGGGTGTTCTTCGCCAGCTACCAGGGCTTCGTCAACCCGTCCTCGTTCAACTTCTTCGAGTCGGCGCTGATCCTCGCCATCGTC GTGCTCGGCGGCATGGGCTCGACGGTCGGGGTGGTGATCGCCGCCTTCGTCCTCACCGTGGCGCCGGAGCTGCTGCGCAGCTTCGCCGACATCCGCGTGC TGCTGCTCGGGATACTCATGGTGGTGATGATGATCTGGCGGCCGCGCGGGCTGATCCGCATCAGCCGGGTGGGCTTCGCCCCGCGCAAGGGGGTGGCGCC
|
|
DNA Sequence for Gene |
>NT38_RS18855
ATGAGCGACAAGATCCTCAGCGTCGAGCACCTGATGATGCACTTCGGCGGCATCAAGGCGCTCAACGACGTCAACCTCGACGTCGAGCGCGGTTCGATCA CCGCGCTGATCGGCCCCAACGGCGCCGGCAAGACCACCGTGTTCAACTGTCTCACCGGCTTCTACAAGGCCACCGGCGGCAACATCCTGCTCAACACCCA GGGGCGCACCACGGACGTCATCCAGGTGCTCGGCGAGCCGTTCCAGCTGGACGACTTCGTCAAGCCGCCGCAACTGGGCAGTCGCCTCTACTACAAGATG TTCGGCGGCACCCACCTGGTGAACCGCGCCGGGCTGGCGCGGACCTTCCAGAACATCCGCCTGTTCAAGGACATGTCGGTGGTGGAGAACCTGCTGGTGG CGCAGCACATGTTCGTCAACCGCAACCTGCTCGCCGGCATCCTCAACACTCCCGGCTATCGCCGCGCCGAGAGCGAGGCGCTGGACCACGCGTTCTACTG GCTGGAGGTGGTCGACCTGGTGGACTGCGCCAACCGCCTGGCCGGCGAGATGTCCTACGGCCAGCAGCGGCGCCTGGAGATCGCCCGGGCCATGTGCACG CGGCCGGAACTCATCTGCCTGGACGAACCGGCCGCCGGCCTCAACCCGGCCGAGACCCACGCCCTGAGCAACATCGTCCGCTACCTGCGCGACCACCACG GGATCACCGTACTGCTGATCGAGCATGACATGGGCATGGTGATGAACATCTCCGACCACATCATCGTACTCGACCACGGCGACGTGATCGCCCGTGGCAA CCCCGAACAGATCCGCCATGACGAGAAGGTGATCGCCGCCTATCTCGGTGCCGACGAAGAGGAGCTGTCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGCGGCGTTGCTGGAATTCCGTGAGGTGGACGTGTTCTACGGGCCGATCCAGGCGCTGAAGAAGGTCTCGCTGCAGGTCAACGAGGGCGAGACGGTGAG CCTGATCGGCGCCAACGGCGCGGGCAAGTCGACGCTGTTGATGTCGATCTTCGGCCAGCCGCGCGCGGCGGCCGGGCAGATCCTCTATCGCGGCCAGGAC ATCCGCCAGAAGTCGGCGCACTACGTGGCGTCCAACGGCATCGCGCAGTCGCCGGAAGGACGCCGGGTGTTCCCCGACATGAGCGTCGAGGAAAACCTGC TGATGGGTACCATTCCCATCGGCATGGACCACGCCGAGGAGGACATGCAGCGCATGTTCGAGCTGTTCCCGCGCCTGAAGGAGCGGCGCAACCAGCGCGC CATGACCATGTCCGGCGGCGAGCAGCAGATGCTCGCCATCGCCCGCGCGCTGATGAGCCGGCCGAAGTTGCTGTTGCTCGACGAGCCCTCCCTGGGCCTG
|
|
Amino Acid Sequence |
>amino acid ABC transporter ATP-binding protein
MSDKILSVEHLMMHFGGIKALNDVNLDVERGSITALIGPNGAGKTTVFNCLTGFYKATGGNILLNTQGRTTDVIQVLGEPFQLDDFVKPPQLGSRLYYKM FGGTHLVNRAGLARTFQNIRLFKDMSVVENLLVAQHMFVNRNLLAGILNTPGYRRAESEALDHAFYWLEVVDLVDCANRLAGEMSYGQQRRLEIARAMCT RPELICLDEPAAGLNPAETHALSNIVRYLRDHHGITVLLIEHDMGMVMNISDHIIVLDHGDVIARGNPEQIRHDEKVIAAYLGADEEELS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|