Strain | Pseudomonas aeruginosa strain AZPAE15022 AZPAE15022_contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGGCGCCGGCTTCATGATGCAGATGCTGCAGTTCCAGGAAGAACGGCTGTTCGGCGCGGCCAACATGATCAAGGGCCTGGAGCACTGCATCGACGTCA CCATCGAGTATTGCAAGGAGCGCAGGACCTTCGGCCAGCCGCTGATCGACAACCAGGTCATCCACTTCCGCATGGCCGAGATGATGACCGAGGTCGAGGC GCTGCGCGCCCTGGTCTACCAGGCCACCGAGCTGTACGTGAAAGGCAGGGACGTGACGCGCCTGGCTTCCATGGCCAAGCTCAAGGCCGGCCGCCTCGGC CGCGAGGTCAGCGACGCCTGCCTGCAGTACTGGGGCGGCATGGGCTTCATGTGGGACAACCCGGTCTCCCGCGCCTACCGCGACACCCGCCTGGTATCCA TCGGCGGCGGTGCCGACGAGATCATGCTCGGCATCATCTGCAAGCTGATGGGCATCCTGCCGGGCAAGAAGAAAGGCTGACGTTCCAGGAGGAAACCGGC
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DNA Sequence for Gene |
>NT38_RS16340
ATGAGCCTGCCGCATTGCGAGACCCTGCTGCTGGAACCCGTCGAGGGCGTCCTGCGGATCACCCTGAACCGCCCGCAAAGCCGCAACGCCATGAGCCTGG CGATGGTCGGCGAACTGCGCGCGGTGCTCGCCGCCGTGCGCGACGACCGTAGCGTGCGGGCGCTGGTGCTGCGCGGCGCCGACGGGCACTTCTGCGCCGG CGGCGACATCAAGGACATGGCCGGTGCCCGCGCCGCCGGGGCGGAAGCCTACCGCACGCTGAACCGCGCCTTCGGCAGCCTGCTGGAGGAAGCCCAGGCC GCCCCGCAACTGCTGGTGGCGCTGGTGGAAGGCGCGGTGCTCGGCGGCGGTTTCGGCCTGGCCTGCGTGTCGGACGTAGCGATCGCCGCCGCCGATGCGC AGTTCGGCCTGCCGGAAACCAGCCTCGGCATTCTCCCGGCGCAGATCGCGCCTTTCGTGGTCCGCCGCATCGGCCTGACCCAGGCCCGCCGCCTGGCCCT CACCGCCGCCCGCTTCGACGGCCGCGAGGCGCTGCGCCTGGGCCTGGTGCATTTCTGCGAGGCCGACGCCGATGCCCTCGAACAGCGCCTGGAGGAAACC CTCGAGCAACTGCGCCGCTGCGCGCCGAACGCCAACGCCGCCACCAAGGCCCTGCTGCTGGCCAGCGAAAGCGGCGAACTCGGCGCCCTGCTGGACGATG CGGCGCGCCAGTTCGCCGAAGCGGTGGGCGGCGCCGAAGGCAGCGAAGGCACCCTGGCCTTCGTACAGAAACGCAAGCCGGTCTGGGCCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCACGACCGCGAAACAGGGCAACAGCCTCCAGGAGCCGAACGACATGCCCAGCTTCAACAAGATCCTCGTCGCCAACCGCGGTGAAATCGCCTGCCGGG TGCTGCGCACCGCCCATGAACTGGGCTACCGCAGCGTCGCCGTGTACAGCGAGGCGGACGCCGACGCCCGCCATGTGCAACTGGCCGACGAGGCCGTGTG CATCGGCCCGGCAGCGGTGGCGCAGTCCTACCTGAACCTCGAGGCGATCCTCGACGCCGCCCGTCGCAGCGGCGCCGAGGCGATCCACCCCGGCTACGGC TTCCTCTCCGAGAACGCCGAATTCGCCCGTGCCTGCGAAGCCGCCGGGATCGTCTTCATCGGCCCGGATGCGGAAGCCATCCACCTGATGGGCAGCAAGC GCCTGTCGAAGATCGCCATGCTCGCCGCCGGGGTGCCGTGCATCCCCGGCTACGAAGGCGCCGAACAGGACGACGCGACCCTGCGGCGCGAGGCCGAACG
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Amino Acid Sequence |
>enoyl-CoA hydratase
MSLPHCETLLLEPVEGVLRITLNRPQSRNAMSLAMVGELRAVLAAVRDDRSVRALVLRGADGHFCAGGDIKDMAGARAAGAEAYRTLNRAFGSLLEEAQA APQLLVALVEGAVLGGGFGLACVSDVAIAAADAQFGLPETSLGILPAQIAPFVVRRIGLTQARRLALTAARFDGREALRLGLVHFCEADADALEQRLEET LEQLRRCAPNANAATKALLLASESGELGALLDDAARQFAEAVGGAEGSEGTLAFVQKRKPVWAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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