Strain | Pseudomonas aeruginosa strain AZPAE15022 AZPAE15022_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGGGTGCCGCGCAGCTCGCCCTTCAACGCCAGAGCGTAGCGTTCGAAGCCTTCCAGTTCGCCGAGGATGCGCAAGGTTTCCTGGTGGAACAGCTCGCCC TTGCTGGTCAGGCTGAAGCCACCGCGGCCACGGTGGCAGAGCACGATGCCGAGCTGGTTCTCCAGTTGGCTCATGTAGGTGCTGATCGCCGAGGTCGACA GGTTCAACTCCTGCTGGGCGGCGGCGAAGCCCTGGTGGCGCACCACCGCGGCGAAGATGCGCAACAGGCGCAGGTCGGGCAAGGCGTTGGACACGGCGAC TCCGGTTTGCGGGCGAGGATTTCGGACAGCAGGCCGAGGCAAAGGCCGCCGTCCGGGCTCGGCGGCGAAGTCTAGCCGCTTCGCCGTTAGTTTAGAAATC TCTGAACTGATTATTTGTAGCCAGCGATTTGACTCGCTACCGGCTGTGAAGAGAATCCGTCCGACCCCTAAAACAACCACAACGACCGTGAGGCCACCCC
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DNA Sequence for Gene |
>NT38_RS01240
GTGGACAAGAATCTCCACCAGCCCCTGGGCGGCAATGAAATGCCCCGCTTCGGCGGCATCGCCACCATGATGCGCCTGCCCCATGTCCAGTCCCCCGCCG AACTCGACGCCCTTGATGCCGCCTTCGTCGGCGTGCCCCTCGACATCGGCACCTCCCTGCGCTCCGGTACCCGCTTCGGCCCCCGCGAGATCCGCGCCGA ATCGGTGATGATCCGTCCCTACAACATGGCCACCGGCGGCGCCCCCTTCGACTCGCTGAACGTGGCGGACATCGGCGACGTCGCGATCAACACCTTCAAC CTGCTGGAAGCCGTGCGCATCATCGAGCAGGAATACGACCGCATCCTCGGTCACGGCATCCTCCCGCTGACCCTCGGCGGCGACCACACCATCACCCTGC CGATCCTCCGCGCGATCAAGAAGAAGCACGGCAAGGTCGGCCTGGTCCACGTCGACGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGC CCACGGCACCACCTTCCGCCGCGCGGTGGAAGAAGACCTGCTGGATTGCGACCGTGTTGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGAGGAC TTCAACTGGAGCCGCAAGCAGGGCTTCCGCGTGGTGCAGGCCGAGGAGTGCTGGCACAAGTCGCTGGAGCCGCTGATGGCCGAGGTCCGCGAGAAGGTCG GCGGCGGCCCCGTCTACCTGAGCTTCGACATCGACGGCATCGACCCGGCCTGGGCGCCCGGCACCGGCACCCCGGAAATCGGCGGCCTGACCACCATCCA GGCGATGGAAATCATCCGCGGCTGCCAGGGCCTGGACCTGATCGGCTGCGACCTGGTCGAAGTCTCGCCGCCCTACGACACCACCGGCAACACTTCGTTG CTGGGCGCCAACCTGCTCTATGAAATGCTCTGCGTCCTCCCGGGCGTGGTGCGTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGTAGCGCGACCATGACCGACGACCGCGTCGAACAGGTGCTGGAGGCCGCCCGCCGACTGGTGGCGGCCTTCGCCCGCAACGATGCCGAGGCCTATTT CGCCGCCTTCAGCGAGGACGCCAGCTTCATCTTCCACAACTGGCCTCAGCCGCTGCGCTCGCGCGCGGCCTACCGCGAGTTGTGGGAGCGCTGGCGACGC GAGGACGGCTTCGAAGTGCTGGCGTGCGAATCCAGCAATACCTGCGTCAGCCTGCAAGGCGACCTGGCGATCTTCAGCCACGATGTCGCCACCCGGCTGC GCCTCCAGGGAACGGAAAGCCTGAACCGGGAACGGGAAACCATCCTGTTCCGCCTAGAACAACAAGAAGGCCGTTGGCTGGCCTGCCATGAGCACTTGTC GGCGATGCCGGAGTACCTGCCATCGACTAGCTAGCTCTCCCGGGAGAACGTCATGGATAACAACAATAACCAACACGCAATCACACGCATCGAAACCTTC
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Amino Acid Sequence |
>agmatinase
MDKNLHQPLGGNEMPRFGGIATMMRLPHVQSPAELDALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNMATGGAPFDSLNVADIGDVAINTFN LLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAIKKKHGKVGLVHVDAHADVNDHMFGEKIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGYTAED FNWSRKQGFRVVQAEECWHKSLEPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTTGNTSL LGANLLYEMLCVLPGVVRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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