Pseudomonas sp. UW4, PputUW4_03895 (pseC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TACCTGCACCGGTTGGCGCTGGAGCAGAACTACTCGGCGGTGTCGAAGGTGTGCCTGATGGTGCGTAAGGCGTTGTTCGACGAACTGGACGGTCTGGACG GCGTGACGTTCGCCGACGGCTTGAGCGACGTCGATCTGTGCCTCAGGGCCGGTCAGGCCGGTTTCCTCACCGTATGGACGCCGCGGGTACAGGTCATTCA TTGCGGTGAAGTGCCACAGGTGCCGCAGGCCCTCGATGCATTGCGTGACAAGTGGGCGGCAGCCTTTGCCCAGGACCAGGCCTATAACGCCAATCTGGCC TTGAGCGGCAAAGGTTTTGCCCTGGGCGAAGCTGCCCCGGTGAACTGGGTTCAGTTGCTCGGCTAGGCCCGGCGAACAGTTATAAGGATTCAAGGCATGT CCAACGGAACATCGATTTTCATCTCAGGCGACACCGGTTCGTACGGGCGTCATTTCGTCCGTCCTTTGCCGGGCAAGCTCGCCCATGCCTGGATGCCAGC
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| DNA Sequence for Gene |
>PputUW4_03895
|pseC
ATGATTCCTTACGCTCGGCAAAGCCTCGATCAGGCGGACATCGACGCCGTGGTCAGCGTCCTGCAGTCTGACTGGCTGACCCAGGGGCCGACCATCGAGC GCTTCGAGCGGGCGATGGCCGAGCGCTGCGAAGCTGATTTTGCCGTGGCAGTGTGCAATGCCACGGCGGCCCTGCACATCGCTTGCCTGGCGGCCGGGCT CGGGCCGGGCGACTGGCTGTGGACGACACCGAACACCTTTCTCGCCTCGGCAAACTGTGGTCGCTACTGCGGTGCCGAGGTGGATTTTGTCGATATCGAC CCGCTCACCTGGAACCTCGATGCCGGTGCGCTGGCTGTCAAGCTGGAGCGGGCCGAGCGTGAAGGCAGGCTGCCGAAAGTGCTCGTGGCCGTGGCGTTCT CGGGCCAGAGTTGCGACATGCGCAGGATTGCCGCACTGGCCAAGCGCTATGGCTTTACGGTGATCGAAGACGCGGCCCATGCCGCCGGTGCCTCCTACGC CGGGCGCCCGGTGGGGTGTGGCGAGTTTGCCGCGATGACCGTGTTCAGCTTTCACCCGGTGAAGATCATCACCAGTGCCGAGGGCGGCATGGTCATGACC AATTGCCCGGAACTTGCCGAGCGTTTGCAACGCCTGCGCAGCCACGGCATGACCCGGGATCCGCAGCAAATGACCGGACCCAGCCACGGTCCCTGGTACT ACGAGCAGGTGGAGCTGGGGTTCAATTACCGTATTACCGACCTGCAAGCGGCCCTTGGCTTGTCGCAGTTGAACAAGCTGGATGAGTTTATCGAGCGTCG GCGTGAACTGGCGGCGCGTTATGACCGTTTGCTGGCGTATCTGCCGTTGACACTACCCGGTGCACAACCTGAGGCCGAGTCGTCCTGGCACCTGTATGTG GTGCGGCTGCAACTCGATCAGATCACGCTCACCCATCGAGAGGTGTTCGAGGGATTGCGGGCTGCCGGGGTCGGGGTGAACCTGCACTATATCCCCGTGC ATTTGCAGCCTTACTACCGTGACCTGGGGTTCGCCAAAGGTGATTTCCCGCAGGCCGAGCGTTATTACGCCGAAGCCATCAGCTTGCCGTTGTATCCGTT GCTCAGTCATGAGCAGCAGGACTATGTGGTCGAGCAGATGCAGCAACTGATCGAAATCATCCAGCCATTGCGACGAGTGGGAAATGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGTGAACTGACTGAGCAGGAGGCTTTCTGGCAGGGCGAATTCGGCAACCAGTACGTTGACCGCAATCTCGGACAGCCGCTGGTGGCGGCCAACCTGGC GCTGTTCGCCAAGGCACTGACACGGGTCGGACGCCTCGACAGCCTGTTGGAACTGGGCACCAATGCCGGTAACAACCTGCAGGCTCTGCACCAGCTGTTG CCGCGCTGCGAGTTGTTCGGCGTGGAGATCAATGCCAATGCGTGCGCCGCTGCCAAGGCGTTGGGTATTGCCCACCTCTGGCACGGCTCGCTGTTCGATT TCCCTCGCGAGCGCACCTTCGACCTGACCCTGAGCAAAGGCGTACTGATTCACCTGGCACCGGAGTTGCTGCCGGCTGCGTACGCGCAACTGTATGAGCT GAGCCAGCGCTACATATTGATCGCCGAGTACTACAACCCGGCGCCGGTCGAGGTTCCGTATCGCGGCAACAGCGGCAAGTTGTTCAAGCGCGATTTTGCC
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| Amino Acid Sequence |
>DegT/DnrJ/EryC1/StrS aminotransferase
MIPYARQSLDQADIDAVVSVLQSDWLTQGPTIERFERAMAERCEADFAVAVCNATAALHIACLAAGLGPGDWLWTTPNTFLASANCGRYCGAEVDFVDID PLTWNLDAGALAVKLERAEREGRLPKVLVAVAFSGQSCDMRRIAALAKRYGFTVIEDAAHAAGASYAGRPVGCGEFAAMTVFSFHPVKIITSAEGGMVMT NCPELAERLQRLRSHGMTRDPQQMTGPSHGPWYYEQVELGFNYRITDLQAALGLSQLNKLDEFIERRRELAARYDRLLAYLPLTLPGAQPEAESSWHLYV VRLQLDQITLTHREVFEGLRAAGVGVNLHYIPVHLQPYYRDLGFAKGDFPQAERYYAEAISLPLYPLLSHEQQDYVVEQMQQLIEIIQPLRRVGNV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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