Pseudomonas sp. UW4, PputUW4_03861 (flhA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTACGACCCGGAGAAGGGCAGTGCCCCGGTGCTGCTGGCCAAGGGCAGTGACTTCCTGGCCCTGAAGATCCGCGAGATCGCCGCGGCCAACGAGATCCTG CTGCTGGAGTCACCGGCGCTGGCGCGCTCGATTTATTACTCCACCGAACTGGAGCAGGAAATCCCCGGCGGGCTGTATCTGGCGGTCGCGCAGGTACTGG CCTACGTCTATCAGATTCGACAGTACCGGGCGGGCAAGGGCAAACGACCGGATCCGCTCAAGGATGACCTGCCGATTCCGCCGGATTTGCGCCGCGATTC CTGAGTCTAGCGCTCCCACAGGTTCGGCGATAACTTGTGGGAGCGTGGCTTGCCCGCGATGACGTCAGCCCAGGCAGCACATATCCCACTGAAAAATTGC TCTATTTCTCCCTTTGCAAAAGTTGGAAAGCTTCTTGCAGTAGCCGCCCTGCGCCTGCTTCAGGCGTCAAAAGTTTGCTTTAAAGGAACGGGGAAAACCG
|
|
| DNA Sequence for Gene |
>PputUW4_03861
|flhA
GTGGATCGCTCTCAGTTAATCAACAGTGCCCGCAGCAACATTGCCGACCTCAGTCGGGGCAATCTGGGCGTGCCGCTGTTGCTGCTGGTCATGCTGGCGA TGATGATGTTGCCGGTGCCGCCGTTCCTGCTCGACGTGTTCTTCACCTTCAACATTGCCCTGTCCATCGTCGTGCTGCTGGTGTGCGTCTACGCTTTGCG CCCGCTGGATTTCGCGGTGTTCCCGACCATCCTGCTGGTGGCGACGCTGTTGCGCCTGGCATTGAACGTGGCCTCCACGCGGGTGGTGATGCTCCACGGC CAGGACGGTCACGCGGCCGCCGGCAAGGTGATCCAGGCGTTCGGCGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGTGGTTTTCGCGATCCTGA TGATCATCAACTTCGTCGTGGTGACCAAGGGTGCGGGGCGGATTTCCGAGGTGAGCGCGCGTTTCACCCTCGATGCTATGCCCGGCAAGCAAATGGCGAT CGACGCCGACCTCAACGCCGGCCTGATCGATCAGGCCCAGGCCAAGGCCCGCCGCTCGGAAGTCGCCCAGGAAGCCGAGTTCTACGGTTCCATGGACGGT GCCAGCAAATTCGTCCGTGGTGACGCCATTGCCGGCCTGTTGATCCTGTTCATCAACCTGATCGGCGGCATGGCAGTCGGTATCTTCCAGCACGGCATGA CCTTCGGCGATGCCGGCAAGGTGTATGCGCTGTTGACCATCGGTGACGGTTTGGTGGCGCAATTGCCATCACTGTTGTTATCGACAGCAGCGGCGATCAT GGTGACCCGTGCGTCCGGTTCGGAAGACATGGGCAAACAGATCAATCGCCAGATGTTCGCCTCGCCCAAGGCGCTGGCGGTGGCGGCAGGTTTGATGGCG GTCATGGGCCTGGTGCCCGGCATGCCGCACTTCTCGTTCCTGAGCATGGCGGCCCTGGCGGCCGGTGGCGCTTACCTGTTCTGGAAAAAGCAGAACGTCG CCAAGGTTCAGGCCCTGCAAGAGGTCAAGCGCCAGCAGGAGCTGCTGCCGTCGCCGGCCCGTGCCCAGGAAACCAAGGAGCTTGGCTGGGATGACGTGAC GCCCATCGACATGATCGGCCTGGAAGTGGGCTATCGCCTGATTCCGCTGGTGGACCGCAACCAGGGCGGCCAGTTGCTGGCGCGGATCAAGGGGGTGCGC AAGAAGCTGTCCCAGGATCTGGGCTTCCTGATGCCGACCGTGCATATCCGTGACAACCTCGACCTGGCGCCAAGTGCCTATCGCCTGACCCTGATGGGGG TGATCCTGGCGGAAGCGGAGATTTACCCGGATCGCGAGCTGGCGATCAACCCGGGGCAGGTCTACGGCACGCTCAACGGCATTACCGCCAAAGATCCGGC TTTCGGCCTGGAGGCGGTCTGGATTGAGATCAGCCAGCGTGCCCAGGCGCAATCCCTCGGTTACACGGTGGTCGATGCCAGTACAGTGGTGGCCACCCAC TTGAACCAGATACTCTACAAGCATTCCAGTGAACTGATCGGTCACGAAGAAGTGCAGCAGCTCATGCAATTGCTGGCCAAAAGCTCGCCGAAACTGGCTG AGGAGCTGGTGCCGGGCGTGGTTTCGCTGTCGCAACTGCTCAAGGTGCTGCAAGCGCTGTTGGCCGAGCAAGTGCCGGTTCGCGATATCCGTAGCATTGC CGAGGCCATCGCCAACAATGCCGCCAAGAGTCAAGATACCGCCGCGCTGGTGGCTGCCGTGCGGGTTGGCGTCTCCCGCGCAATCGTCCAAAGCATTGTA GGCACTGAGTCGCAGCTGCCAGTTATCACGCTGGAGCCAAGGTTGGAACAGATATTGCTCAATAGTCTGCAAAAGGCAGGACAAGGCTCGGAAGAGGGCG TTCTGCTGGAGCCAAGCATGGCTGAGAAACTGCAACGCTCGCTGATTGACGCGGCGCAGCGCCAGGAGATGCAAGGTCAGCCGGTGATTCTGCTGGTGGC CGGTCCGGTTCGCGCGATGCTCTCGCGATTCGGCCGGCTCGCAGTCCCGGGTTTGCACGTGTTGGCTTACCAGGAAATCCCTGACAACAAGCAAGTGACC ATCGTTGCGACAGTAGGGCCCAACGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTAGTGGTTTATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTTCGCGATGAGCTGGGCGCTGATGCAGCCATTATCGG CAACCGCCGGATTGCCGGGGGCGTCGAGCTGACGGCTGCGCTGGATTACAAGTTGTCGGCGCTGGCGCCGCGTGTTCCGAACATGGAGCTCGAAGACGAG CTGCGCAAGACTCAGTCGCGGATCGTCACCGCCCAGGCCGAATTGAGCCTGCGTGGCGATGGCGAGAGCGACAATGCGACCAACCGCCAGTTGTTCGCCG GCTTGCCGCTGACCGCAGCCGAGCCGCTGATCGAGCCTACGTATGACCAACCTCGTCGCCCGGCACCAGCTGCTGTACCTGCGTCCGGTGGCGTGGACCC GCGTGCGTTCGACTCGATGCGTTTCGAGCTCAACAGCCTGCGCGAACTCATGGAAGTACAACTCGGGTCCCTGGCCTGGAACCAGCTGCAAGGCAGCCGT
|
|
| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRSQLINSARSNIADLSRGNLGVPLLLLVMLAMMMLPVPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVMLHG QDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKARRSEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMAVGIFQHGMTFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKQINRQMFASPKALAVAAGLMA VMGLVPGMPHFSFLSMAALAAGGAYLFWKKQNVAKVQALQEVKRQQELLPSPARAQETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAINPGQVYGTLNGITAKDPAFGLEAVWIEISQRAQAQSLGYTVVDASTVVATH LNQILYKHSSELIGHEEVQQLMQLLAKSSPKLAEELVPGVVSLSQLLKVLQALLAEQVPVRDIRSIAEAIANNAAKSQDTAALVAAVRVGVSRAIVQSIV GTESQLPVITLEPRLEQILLNSLQKAGQGSEEGVLLEPSMAEKLQRSLIDAAQRQEMQGQPVILLVAGPVRAMLSRFGRLAVPGLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|