Strain | Pseudomonas sp. UW4 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCCTGCGCTGCTGATACGCGCTGCCAGCGCCACGGCGCCAGATCCGCAACTGCTGCGCGATATCGATCAATGCCTGGGGCTAAACGACGGACCGGTGCTG GCCTACGACGATCCACGACGCTCCATCGGTAAGCGGGTGCGGATCGAGAACGGCCGGATCACCGCGATCCGCCTGGCGGGTGAAACCCTCGCCCGGCACT GGCTGCAAAACCTCTGGCTCGAAGGTCGCGCCGATGAACAGCTACGGCGCTGGCTGCTCGCGCCCTTGAGTGCCCCACCGGGCCAGGTTGACGCCGAAGC GATCGGTAACAAAACCCTGTGCAACTGTAAGAACGTCAGCCAAAACGCGGTCTGCGCCGGCATCCGCCGAGGCCTGGACTTGCCGGGGTTGAAACAAGAA TTGGGTTGCGGCACGCAATGCGGCTCCTGCGTCCCGGAAATCAAGCGTTTGTTGGCCGCCACCGCGCAGCCGCAAGCCGCCATCTCGTGAGGAAAACACT
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DNA Sequence for Gene |
>PputUW4_03645
|cobA2
ATGAGCGCAAAAGTCTGGCTGGTGGGTGCAGGTCCCGGTGATCCTGAATTACTGACCCTCAAAGCTGTTCGGGCGTTGAGAGAGGCGGATGTCGTGCTGA TCGACGATCTGGTCAACGATGCGGTGCTGGAGCACTGCCCCGGCGCGCGGATAATTCCTGTGGGTAAGCGCGGTGGCTGTCGTTCAACGCCGCAAGCCTT TATCCATCGCCTGATGTTGCGTTATGCCCGCCAGGGCAAATGCGTGGTGCGCCTCAAGGGTGGCGACCCGTGCATCTTCGGGCGTGGCGGTGAAGAAGCG CAGTGGTTGCGCGAGCGTGGTATCGAGGTTGAGCTGGTCAATGGCATTACCGCCGGCCTGGCGGGCGCGACGCAATGCGATATTCCATTGACCCTGCGCG GCGTGGCACGAGGGGTAACGCTGGTGACCGCCCACACTCAGGATGACAGCAGCCTGAACTGGCAAGCGCTGGCCCAAGGTGGCACGACACTGGTGATCTA CATGGGGGTGGCAAAGCTCAGTGAAATTCGCAAGCAATTGCTGGCCGGTGGAATGGCAGCCGATACGCCCGTGGCAATGATCGAAAATGCTTCCCTGCCG CACCAACGGGAATGCTGGAGCGACCTGACAGCCATGGAGGACGATGCCCATAGCTTCCAGTTGAAAAGTCCGGCGATCCTGGTGATCGGTGCTGTGGCGG CCTGTGATGAGATCAAAAGATCGCAGCCTGCGGCAGCTCCTACACTGGTTCGGCATTTATCCCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAGCTGCCGCAGGCTGCGATCCTTTAGAAGCAACGCAAAACCAATGCTGAAACCCAAATCGCAGACAAAGAAAAGCCCGGCCTGAGCCGGGCTTTTCTCA GAGCTGCGGGCTAATTACTTAGCTTGAGCTTCAACCTGCGCTTCTACGCGACGGTTAACAGCGCGACCAGCTTCAGTTTTGTTGTCAGCAACTGGGCGGG ATTCGCCGTAGCCAACGGACTGAACGCGGGACGATTCAACACCGTACTGGTTGGTCAGAACTTGTTTAACGGCGTTTGCACGACGCTCGGACAGTTTCTG GTTGTAAGCGTCAGGACCGACGGAGTCAGTGTGACCTTCAACAGTAGTGCTGGTGGATGGGTACTGCTTCATGAAGTCAGCCAGGTTCTTGATGTCGCCG TAGCTGTTTGGCTTGACTACCGACTTGTCGAAGTCGAACTTCACGTCCAGCTCAACACGAACAACTTCAGCAACTGCCGGGCAGCCGTCAGCGTCAACAG
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Amino Acid Sequence |
>uroporphyrin-III C-methyltransferase
MSAKVWLVGAGPGDPELLTLKAVRALREADVVLIDDLVNDAVLEHCPGARIIPVGKRGGCRSTPQAFIHRLMLRYARQGKCVVRLKGGDPCIFGRGGEEA QWLRERGIEVELVNGITAGLAGATQCDIPLTLRGVARGVTLVTAHTQDDSSLNWQALAQGGTTLVIYMGVAKLSEIRKQLLAGGMAADTPVAMIENASLP HQRECWSDLTAMEDDAHSFQLKSPAILVIGAVAACDEIKRSQPAAAPTLVRHLSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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